RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR400W	YLR400W	YJL163C	P46996	555 aa		4.16	□□□□□ -1.74
YLR400W	YLR400W	NIT3	P49954	291 aa		4.16	□□□□□ -1.74
YLR400W	YLR400W	YGR283C	P53336	341 aa	Predicted RBP	4.16	□□□□□ -1.74
YLR400W	YLR400W	LGE1	Q02796	332 aa	Known RBP	4.16	□□□□□ -1.74
YLR400W	YLR400W	LRS4	Q04087	347 aa	Known RBP	4.16	□□□□□ -1.74
YLR400W	YLR400W	NGG1	P32494	702 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	SWE1	P32944	819 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	TPM2	P40414	161 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	TAD1	P53065	400 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	GPG1	P53130	126 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	FOL1	P53848	824 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	YNL193W	P53870	558 aa		4.15	□□□□□ -1.75
YLR400W	YLR400W	EMC3	P36039	253 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	YIR042C	P40586	236 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	NOP2	P40991	618 aa	Known RBP	4.14	□□□□□ -1.75
YLR400W	YLR400W	PFA3	P42836	336 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	GYP8	P43570	497 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	PEX8	P53248	589 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	NRG1	Q03125	231 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	CRR1	Q05790	422 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	IRC13	Q08630	104 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	THI21	Q08975	551 aa		4.14	□□□□□ -1.75
YLR400W	YLR400W	PRC1	P00729	532 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	SFP1	P32432	683 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	PCL5	P38794	229 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	YGR237C	P50089	785 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	DAM1	P53267	343 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	GPR1	Q12361	961 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	NDJ1	Q12366	352 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	TMA17	Q12513	150 aa		4.13	□□□□□ -1.75
YLR400W	YLR400W	LAT1	P12695	482 aa	Known RBP	4.12	□□□□□ -1.75
YLR400W	YLR400W	PMC1	P38929	1173 aa	Predicted RBP	4.12	□□□□□ -1.75
YLR400W	YLR400W	MGS1	P40151	587 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	TY4A-J	P47023	414 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	TAH11	P47112	604 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	PMT3	P47190	753 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	VPS73	P53142	486 aa	Known RBP	4.12	□□□□□ -1.75
YLR400W	YLR400W	RIA1	P53893	1110 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	ASM4	Q05166	528 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	RSC3	Q06639	885 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	THI73	Q07904	523 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	TGL5	Q12043	749 aa		4.12	□□□□□ -1.75
YLR400W	YLR400W	TOM70	P07213	617 aa	Known RBP	4.11	□□□□□ -1.75
YLR400W	YLR400W	VBA3	P25594	458 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	GRX7	P38068	203 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	TDP1	P38319	544 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	HOS4	P40480	1083 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	YJR120W	P47157	116 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	HLJ1	P48353	224 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	YBR182C-A	Q8TGU6	64 aa		4.11	□□□□□ -1.75
YLR400W	YLR400W	CDC9	P04819	755 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	GFA1	P14742	717 aa	Known RBP	4.1	□□□□□ -1.75
YLR400W	YLR400W	SEC6	P32844	805 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	SAP190	P36123	1033 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	ALG2	P43636	503 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	HXT16	P47185	567 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	UME1	Q03010	460 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	YDR514C	Q04408	483 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	SGO1	Q08490	590 aa		4.1	□□□□□ -1.75
YLR400W	YLR400W	CDC43	P18898	376 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	PEX2	P32800	271 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	SPC29	P33419	253 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	HIS7	P33734	552 aa	Known RBP	4.09	□□□□□ -1.75
YLR400W	YLR400W	BCD1	P38772	366 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	SET5	P38890	526 aa	Known RBP	4.09	□□□□□ -1.75
YLR400W	YLR400W	DSS1	P39112	969 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	FMP52	P40008	231 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	UBC11	P52492	156 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	ATP25	Q03153	612 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	REH1	Q06709	432 aa		4.09	□□□□□ -1.75
YLR400W	YLR400W	SRD1	P09007	221 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	KIN3	P22209	435 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	PCL2	P25693	308 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	YEL1	P34225	687 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	MTC2	P34246	357 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	YBR259W	P38338	688 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	SIC1	P38634	284 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	BNR1	P40450	1375 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	GPP1	P41277	250 aa	Known RBP	4.08	□□□□□ -1.76
YLR400W	YLR400W	BAP3	P41815	604 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	NUP145	P49687	1317 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	ZIP2	P53061	704 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	MET13	P53128	600 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	SDA1	P53313	767 aa	Known RBP	4.08	□□□□□ -1.76
YLR400W	YLR400W	COG6	P53959	839 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	TGL2	P54857	326 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	MET7	Q08645	548 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	YOR378W	Q08902	515 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	ATG11	Q12527	1178 aa		4.08	□□□□□ -1.76
YLR400W	YLR400W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
YLR400W	YLR400W	GSY1	P23337	708 aa		4.07	□□□□□ -1.76
YLR400W	YLR400W	EUG1	P32474	517 aa		4.07	□□□□□ -1.76
YLR400W	YLR400W	PPZ2	P33329	710 aa		4.07	□□□□□ -1.76
YLR400W	YLR400W	YBR071W	P38243	211 aa		4.07	□□□□□ -1.76
YLR400W	YLR400W	CBR1	P38626	284 aa	Known RBP	4.07	□□□□□ -1.76
YLR400W	YLR400W	RIX1	P38883	763 aa	Predicted RBP	4.07	□□□□□ -1.76
YLR400W	YLR400W	RLP7	P40693	322 aa	Known RBP	4.07	□□□□□ -1.76
YLR400W	YLR400W	MTR3	P48240	250 aa	Predicted RBP	4.07	□□□□□ -1.76
YLR400W	YLR400W	TEX1	P53851	422 aa	Known RBP	4.07	□□□□□ -1.76
YLR400W	YLR400W	SSL2	Q00578	843 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms