RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	ECM3	Q99252	613 aa		16.62	■□□□□ 0.25
CCC1	YLR220W	GAL10	P04397	699 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	SNF1	P06782	633 aa	Known RBP	16.61	■□□□□ 0.25
CCC1	YLR220W	CDC33	P07260	213 aa	Known RBP	16.61	■□□□□ 0.25
CCC1	YLR220W	RNR1	P21524	888 aa	Known RBP	16.61	■□□□□ 0.25
CCC1	YLR220W	CBF2	P32504	956 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	HEL1	P36113	551 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	PCH2	P38126	564 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	RSC8	P43609	557 aa	Known RBP	16.61	■□□□□ 0.25
CCC1	YLR220W	ALT1	P52893	592 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	EAR1	Q03212	550 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	YPR027C	Q12079	277 aa		16.61	■□□□□ 0.25
CCC1	YLR220W	CHS1	P08004	1131 aa		16.6	■□□□□ 0.25
CCC1	YLR220W	YHR202W	P38887	602 aa		16.6	■□□□□ 0.25
CCC1	YLR220W	POL31	P46957	487 aa		16.6	■□□□□ 0.25
CCC1	YLR220W	DRN1	P53255	507 aa	Known RBP	16.6	■□□□□ 0.25
CCC1	YLR220W	RCR2	Q03446	210 aa	Known RBP	16.6	■□□□□ 0.25
CCC1	YLR220W	UTP5	Q04177	643 aa	Known RBP	16.6	■□□□□ 0.25
CCC1	YLR220W	RPS3	P05750	240 aa	Known RBP	16.59	■□□□□ 0.25
CCC1	YLR220W	DYS1	P38791	387 aa		16.59	■□□□□ 0.25
CCC1	YLR220W	SBE2	P42223	864 aa	Known RBP	16.59	■□□□□ 0.25
CCC1	YLR220W	PHO86	P46956	311 aa		16.59	■□□□□ 0.25
CCC1	YLR220W	STP1	Q00947	519 aa		16.59	■□□□□ 0.25
CCC1	YLR220W	OPY2	Q06810	360 aa		16.59	■□□□□ 0.25
CCC1	YLR220W	PKH2	Q12236	1081 aa	Known RBP	16.59	■□□□□ 0.25
CCC1	YLR220W	UBR2	Q07963	1872 aa		16.59	■□□□□ 0.25
CCC1	YLR220W	SEC23	P15303	768 aa	Known RBP	16.58	■□□□□ 0.24
CCC1	YLR220W	MNR2	P35724	969 aa		16.58	■□□□□ 0.24
CCC1	YLR220W	ESC8	Q08119	714 aa		16.58	■□□□□ 0.24
CCC1	YLR220W	SDH5	Q08230	162 aa		16.58	■□□□□ 0.24
CCC1	YLR220W	MTF2	P10849	440 aa		16.57	■□□□□ 0.24
CCC1	YLR220W	SEC21	P32074	935 aa	Known RBP	16.57	■□□□□ 0.24
CCC1	YLR220W	KDX1	P36005	433 aa		16.57	■□□□□ 0.24
CCC1	YLR220W	JNM1	P36224	373 aa		16.57	■□□□□ 0.24
CCC1	YLR220W	AGP2	P38090	596 aa		16.57	■□□□□ 0.24
CCC1	YLR220W	APN2	P38207	520 aa		16.57	■□□□□ 0.24
CCC1	YLR220W	YEL023C	P39992	682 aa		16.57	■□□□□ 0.24
CCC1	YLR220W	TIF35	Q04067	274 aa	Known RBP	16.57	■□□□□ 0.24
CCC1	YLR220W	HAP2	P06774	265 aa		16.56	■□□□□ 0.24
CCC1	YLR220W	RRP43	P25359	394 aa	Predicted RBP	16.56	■□□□□ 0.24
CCC1	YLR220W	ADK2	P26364	225 aa		16.56	■□□□□ 0.24
CCC1	YLR220W	PUS2	P53167	370 aa		16.56	■□□□□ 0.24
CCC1	YLR220W	DAS2	Q12084	232 aa		16.56	■□□□□ 0.24
CCC1	YLR220W	TPK1	P06244	397 aa		16.55	■□□□□ 0.24
CCC1	YLR220W	SPT2	P06843	333 aa	Predicted RBP	16.55	■□□□□ 0.24
CCC1	YLR220W	VPS3	P23643	1011 aa		16.55	■□□□□ 0.24
CCC1	YLR220W	HXT1	P32465	570 aa		16.55	■□□□□ 0.24
CCC1	YLR220W	YMC2	P38087	329 aa		16.55	■□□□□ 0.24
CCC1	YLR220W	RFS1	P38234	210 aa	Known RBP	16.55	■□□□□ 0.24
CCC1	YLR220W	EXO5	P38289	585 aa		16.55	■□□□□ 0.24
CCC1	YLR220W	XDJ1	P39102	459 aa		16.55	■□□□□ 0.24
CCC1	YLR220W	EMI2	Q04409	500 aa	Known RBP	16.55	■□□□□ 0.24
CCC1	YLR220W	GAL80	P04387	435 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	CCL1	P37366	393 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	EFM4	P40516	257 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	YFL052W	P43551	465 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	YGR021W	P53212	290 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	SYH1	Q02875	849 aa	Known RBP	16.54	■□□□□ 0.24
CCC1	YLR220W	SPP1	Q03012	353 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	REC8	Q12188	680 aa		16.54	■□□□□ 0.24
CCC1	YLR220W	EFB1	P32471	206 aa	Known RBP	16.53	■□□□□ 0.24
CCC1	YLR220W	HMT1	P38074	348 aa		16.53	■□□□□ 0.24
CCC1	YLR220W	DSE1	P40077	573 aa		16.53	■□□□□ 0.24
CCC1	YLR220W	YTA12	P40341	825 aa		16.53	■□□□□ 0.24
CCC1	YLR220W	SPC98	P53540	846 aa		16.53	■□□□□ 0.24
CCC1	YLR220W	YER152C	P10356	443 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	RAD57	P25301	460 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	SLA2	P33338	968 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	TBS1	P38114	1094 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	SET5	P38890	526 aa	Known RBP	16.52	■□□□□ 0.24
CCC1	YLR220W	SIP5	P40210	489 aa	Known RBP	16.52	■□□□□ 0.24
CCC1	YLR220W	YJR054W	P47114	497 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	YGL036W	P53185	909 aa	Predicted RBP	16.52	■□□□□ 0.24
CCC1	YLR220W	PNG1	Q02890	363 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	SIL1	Q08199	421 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	AHC1	Q12433	566 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	YOL098C	Q12496	1037 aa		16.52	■□□□□ 0.24
CCC1	YLR220W	MFT1	P33441	392 aa	Known RBP	16.51	■□□□□ 0.23
CCC1	YLR220W	NOP4	P37838	685 aa	Known RBP	16.51	■□□□□ 0.23
CCC1	YLR220W	MCX1	P38323	520 aa	Predicted RBP	16.51	■□□□□ 0.23
CCC1	YLR220W	MCM6	P53091	1017 aa	Known RBP	16.51	■□□□□ 0.23
CCC1	YLR220W	MET13	P53128	600 aa		16.51	■□□□□ 0.23
CCC1	YLR220W	MZM1	Q03429	123 aa	Predicted RBP	16.51	■□□□□ 0.23
CCC1	YLR220W	YLR422W	Q06409	1932 aa		16.51	■□□□□ 0.23
CCC1	YLR220W	CIT2	P08679	460 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	YBR284W	P38150	797 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	STB5	P38699	743 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	YMR124W	P39523	943 aa	Known RBP	16.5	■□□□□ 0.23
CCC1	YLR220W	GEM1	P39722	662 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	OSW7	P43611	510 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	STU2	P46675	888 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	MND1	P53102	219 aa		16.5	■□□□□ 0.23
CCC1	YLR220W	POL3	P15436	1097 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	VBA3	P25594	458 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	PEP7	P32609	515 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	FRE1	P32791	686 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	STO1	P34160	861 aa	Known RBP	16.49	■□□□□ 0.23
CCC1	YLR220W	YKL050C	P35736	922 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	VBA5	P36172	582 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	16.49	■□□□□ 0.23	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms