RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C ECM1P39715 212 aa4.58□□□□□ -1.68
YPT52YKR014C RNH70P53331 553 aa4.58□□□□□ -1.68
YPT52YKR014C YDR338CQ05497 695 aa4.58□□□□□ -1.68
YPT52YKR014C RPN7Q06103 429 aaKnown RBP4.58□□□□□ -1.68
YPT52YKR014C TRM13Q12383 476 aa4.58□□□□□ -1.68
YPT52YKR014C RAD18P10862 487 aa4.57□□□□□ -1.68
YPT52YKR014C MEF1P25039 761 aa4.57□□□□□ -1.68
YPT52YKR014C SFP1P32432 683 aa4.57□□□□□ -1.68
YPT52YKR014C HBT1Q07653 1046 aaKnown RBP4.57□□□□□ -1.68
YPT52YKR014C NTG2Q08214 380 aa4.57□□□□□ -1.68
YPT52YKR014C TGL5Q12043 749 aa4.57□□□□□ -1.68
YPT52YKR014C HIS7P33734 552 aaKnown RBP4.56□□□□□ -1.68
YPT52YKR014C YBR053CP38235 358 aa4.56□□□□□ -1.68
YPT52YKR014C YHL017WP38745 532 aa4.56□□□□□ -1.68
YPT52YKR014C NMD2P38798 1089 aaKnown RBP4.56□□□□□ -1.68
YPT52YKR014C YJL163CP46996 555 aa4.56□□□□□ -1.68
YPT52YKR014C STB4P50104 949 aa4.56□□□□□ -1.68
YPT52YKR014C CTK1Q03957 528 aaKnown RBP4.56□□□□□ -1.68
YPT52YKR014C ASM4Q05166 528 aa4.56□□□□□ -1.68
YPT52YKR014C GPR1Q12361 961 aa4.56□□□□□ -1.68
YPT52YKR014C YLR149CQ99296 730 aa4.56□□□□□ -1.68
YPT52YKR014C TRZ1P36159 838 aaPredicted RBP4.55□□□□□ -1.68
YPT52YKR014C PPS1P38148 807 aa4.55□□□□□ -1.68
YPT52YKR014C MIP6P38760 659 aaKnown RBP4.55□□□□□ -1.68
YPT52YKR014C STU2P46675 888 aa4.55□□□□□ -1.68
YPT52YKR014C ALG12P53730 551 aa4.55□□□□□ -1.68
YPT52YKR014C RIA1P53893 1110 aa4.55□□□□□ -1.68
YPT52YKR014C UTP14Q04500 899 aaKnown RBP4.55□□□□□ -1.68
YPT52YKR014C APL2P36000 726 aaPredicted RBP4.54□□□□□ -1.68
YPT52YKR014C YKR018CP36114 725 aa4.54□□□□□ -1.68
YPT52YKR014C YKR051WP36142 418 aa4.54□□□□□ -1.68
YPT52YKR014C REV7P38927 245 aa4.54□□□□□ -1.68
YPT52YKR014C TEX1P53851 422 aaKnown RBP4.54□□□□□ -1.68
YPT52YKR014C REC102Q02721 264 aa4.54□□□□□ -1.68
YPT52YKR014C MCM21Q06675 368 aa4.54□□□□□ -1.68
YPT52YKR014C Q0142Q9ZZW4 58 aa4.54□□□□□ -1.68
YPT52YKR014C PCL10P53124 433 aa4.53□□□□□ -1.68
YPT52YKR014C IRC13Q08630 104 aa4.53□□□□□ -1.68
YPT52YKR014C GIN4Q12263 1142 aa4.53□□□□□ -1.68
YPT52YKR014C SFL1P20134 766 aa4.52□□□□□ -1.69
YPT52YKR014C ADE2P21264 571 aaKnown RBP4.52□□□□□ -1.69
YPT52YKR014C PCL2P25693 308 aa4.52□□□□□ -1.69
YPT52YKR014C BCD1P38772 366 aa4.52□□□□□ -1.69
YPT52YKR014C FMP52P40008 231 aa4.52□□□□□ -1.69
YPT52YKR014C UBC9P50623 157 aaPredicted RBP4.52□□□□□ -1.69
YPT52YKR014C YAP1802P53309 568 aa4.52□□□□□ -1.69
YPT52YKR014C YNL193WP53870 558 aa4.52□□□□□ -1.69
YPT52YKR014C ARG5,6Q01217 863 aa4.52□□□□□ -1.69
YPT52YKR014C MUK1Q02866 612 aa4.52□□□□□ -1.69
YPT52YKR014C TFB2Q02939 513 aa4.52□□□□□ -1.69
YPT52YKR014C ATG33Q06485 197 aa4.52□□□□□ -1.69
YPT52YKR014C SGO1Q08490 590 aa4.52□□□□□ -1.69
YPT52YKR014C CDC43P18898 376 aa4.51□□□□□ -1.69
YPT52YKR014C YHR112CP38716 378 aa4.51□□□□□ -1.69
YPT52YKR014C CCT3P39077 534 aaKnown RBP4.51□□□□□ -1.69
YPT52YKR014C MNN1P39106 762 aa4.51□□□□□ -1.69
YPT52YKR014C HOS4P40480 1083 aa4.51□□□□□ -1.69
YPT52YKR014C BAP3P41815 604 aa4.51□□□□□ -1.69
YPT52YKR014C UBC11P52492 156 aa4.51□□□□□ -1.69
YPT52YKR014C GPD1Q00055 391 aaKnown RBP4.51□□□□□ -1.69
YPT52YKR014C SSL2Q00578 843 aa4.51□□□□□ -1.69
YPT52YKR014C TMN2Q04562 672 aa4.51□□□□□ -1.69
YPT52YKR014C NOP14Q99207 810 aaKnown RBP4.51□□□□□ -1.69
YPT52YKR014C CBR1P38626 284 aaKnown RBP4.5□□□□□ -1.69
YPT52YKR014C PCM1P38628 557 aaKnown RBP4.5□□□□□ -1.69
YPT52YKR014C PCL5P38794 229 aa4.5□□□□□ -1.69
YPT52YKR014C BFA1P47113 574 aa4.5□□□□□ -1.69
YPT52YKR014C TEL2P53038 688 aa4.5□□□□□ -1.69
YPT52YKR014C AIM14P53109 570 aa4.5□□□□□ -1.69
YPT52YKR014C GUD1Q07729 489 aa4.5□□□□□ -1.69
YPT52YKR014C DIA2Q08496 732 aaPredicted RBP4.5□□□□□ -1.69
YPT52YKR014C MIH1P23748 554 aa4.49□□□□□ -1.69
YPT52YKR014C MVD1P32377 396 aaKnown RBP4.49□□□□□ -1.69
YPT52YKR014C SPC42P36094 363 aa4.49□□□□□ -1.69
YPT52YKR014C SDA1P53313 767 aaKnown RBP4.49□□□□□ -1.69
YPT52YKR014C GIS1Q03833 894 aa4.49□□□□□ -1.69
YPT52YKR014C IRC10Q08118 586 aa4.49□□□□□ -1.69
YPT52YKR014C CLF1Q12309 687 aaPredicted RBP4.49□□□□□ -1.69
YPT52YKR014C TAD3Q9URQ3 322 aa4.49□□□□□ -1.69
YPT52YKR014C HMG1P12683 1054 aa4.48□□□□□ -1.69
YPT52YKR014C CCR4P31384 837 aaKnown RBP4.48□□□□□ -1.69
YPT52YKR014C MTH1P35198 433 aa4.48□□□□□ -1.69
YPT52YKR014C YKR075CP36155 307 aa4.48□□□□□ -1.69
YPT52YKR014C MAL31P38156 614 aa4.48□□□□□ -1.69
YPT52YKR014C APN2P38207 520 aa4.48□□□□□ -1.69
YPT52YKR014C NUP60P39705 539 aa4.48□□□□□ -1.69
YPT52YKR014C SDS3P40505 327 aa4.48□□□□□ -1.69
YPT52YKR014C SET2P46995 733 aaKnown RBP4.48□□□□□ -1.69
YPT52YKR014C MTL1P53214 551 aa4.48□□□□□ -1.69
YPT52YKR014C COX18P53239 316 aa4.48□□□□□ -1.69
YPT52YKR014C GND2P53319 492 aa4.48□□□□□ -1.69
YPT52YKR014C YKL033W-AQ86ZR7 236 aa4.48□□□□□ -1.69
YPT52YKR014C RPL8AP17076 256 aaKnown RBP4.47□□□□□ -1.69
YPT52YKR014C RNR1P21524 888 aaKnown RBP4.47□□□□□ -1.69
YPT52YKR014C MNN4P36044 1178 aa4.47□□□□□ -1.69
YPT52YKR014C HLJ1P48353 224 aa4.47□□□□□ -1.69
YPT52YKR014C MET13P53128 600 aa4.47□□□□□ -1.69
YPT52YKR014C YLR001CQ07895 862 aa4.47□□□□□ -1.69
YPT52YKR014C KIN3P22209 435 aa4.46□□□□□ -1.7
YPT52YKR014C HIR1P32479 840 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms