RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH3	YKL141W	PRC1	P00729	532 aa		4.2	□□□□□ -1.74
SDH3	YKL141W	MSD1	P15179	658 aa	Known RBP	4.2	□□□□□ -1.74
SDH3	YKL141W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
SDH3	YKL141W	NDC80	P40460	691 aa		4.2	□□□□□ -1.74
SDH3	YKL141W	BAP3	P41815	604 aa		4.2	□□□□□ -1.74
SDH3	YKL141W	UTP8	P53276	713 aa	Known RBP	4.2	□□□□□ -1.74
SDH3	YKL141W	MRI1	Q06489	411 aa	Known RBP	4.2	□□□□□ -1.74
SDH3	YKL141W	RPN13	O13563	156 aa		4.19	□□□□□ -1.74
SDH3	YKL141W	YEL020C	P39994	560 aa		4.19	□□□□□ -1.74
SDH3	YKL141W	TAD1	P53065	400 aa		4.19	□□□□□ -1.74
SDH3	YKL141W	FMP25	Q08023	583 aa		4.19	□□□□□ -1.74
SDH3	YKL141W	GPR1	Q12361	961 aa		4.19	□□□□□ -1.74
SDH3	YKL141W	TSC11	P40061	1430 aa		4.19	□□□□□ -1.74
SDH3	YKL141W	GEA1	P47102	1408 aa	Predicted RBP	4.19	□□□□□ -1.74
SDH3	YKL141W	SIR3	P06701	978 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	TOP3	P13099	656 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	ORC2	P32833	620 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	YBR259W	P38338	688 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	REV7	P38927	245 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	VAC8	P39968	578 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	LRS4	Q04087	347 aa	Known RBP	4.18	□□□□□ -1.74
SDH3	YKL141W	THI21	Q08975	551 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	HBN1	Q96VH4	193 aa		4.18	□□□□□ -1.74
SDH3	YKL141W	YCL002C	P25565	263 aa		4.17	□□□□□ -1.74
SDH3	YKL141W	SAP190	P36123	1033 aa		4.17	□□□□□ -1.74
SDH3	YKL141W	SNT2	P53127	1403 aa		4.17	□□□□□ -1.74
SDH3	YKL141W	NUP170	P38181	1502 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	PYC1	P11154	1178 aa	Known RBP	4.16	□□□□□ -1.74
SDH3	YKL141W	EMC3	P36039	253 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	GLG1	P36143	616 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	BDH2	P39713	417 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	CTR1	P49573	406 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TEX1	P53851	422 aa	Known RBP	4.16	□□□□□ -1.74
SDH3	YKL141W	ALD6	P54115	500 aa	Known RBP	4.16	□□□□□ -1.74
SDH3	YKL141W	GAD1	Q04792	585 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	UBX5	Q06682	500 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-LR1	P0C2J3	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-F	P0CX63	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-GR2	P0CX64	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-C	P25384	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-DR2	Q03494	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY1B-DR1	Q03855	1755 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-OR1	Q12113	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-DR1	Q12472	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	TY2B-OR2	Q12501	1770 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	PAN1	P32521	1480 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	SSM4	P40318	1319 aa		4.16	□□□□□ -1.74
SDH3	YKL141W	UBS1	P38290	277 aa		4.15	□□□□□ -1.75
SDH3	YKL141W	CCT3	P39077	534 aa	Known RBP	4.15	□□□□□ -1.75
SDH3	YKL141W	ARG2	P40360	574 aa		4.15	□□□□□ -1.75
SDH3	YKL141W	MTR3	P48240	250 aa	Predicted RBP	4.15	□□□□□ -1.75
SDH3	YKL141W	EAF1	Q06337	982 aa		4.15	□□□□□ -1.75
SDH3	YKL141W	YKL033W-A	Q86ZR7	236 aa		4.15	□□□□□ -1.75
SDH3	YKL141W	PDR15	Q04182	1529 aa	Known RBP	4.15	□□□□□ -1.75
SDH3	YKL141W	TY1B-DR3	Q99231	1755 aa		4.14	□□□□□ -1.75
SDH3	YKL141W	RPL8B	P29453	256 aa	Known RBP	4.14	□□□□□ -1.75
SDH3	YKL141W	SET5	P38890	526 aa	Known RBP	4.14	□□□□□ -1.75
SDH3	YKL141W	ECM1	P39715	212 aa		4.14	□□□□□ -1.75
SDH3	YKL141W	ERP6	P53198	216 aa		4.14	□□□□□ -1.75
SDH3	YKL141W	VTH1	P40438	1549 aa		4.14	□□□□□ -1.75
SDH3	YKL141W	VTH2	P40890	1549 aa		4.14	□□□□□ -1.75
SDH3	YKL141W	CAT8	P39113	1433 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	TY2B-B	Q12491	1770 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	HOM2	P13663	365 aa	Known RBP	4.13	□□□□□ -1.75
SDH3	YKL141W	VPS34	P22543	875 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	PAC2	P39937	518 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	PAN2	P53010	1115 aa	Predicted RBP	4.13	□□□□□ -1.75
SDH3	YKL141W	YGR283C	P53336	341 aa	Predicted RBP	4.13	□□□□□ -1.75
SDH3	YKL141W	RIM13	Q03792	727 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	REH1	Q06709	432 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	SPO75	Q07798	868 aa		4.13	□□□□□ -1.75
SDH3	YKL141W	CDC25	P04821	1589 aa		4.12	□□□□□ -1.75
SDH3	YKL141W	GYP8	P43570	497 aa		4.12	□□□□□ -1.75
SDH3	YKL141W	UBP6	P43593	499 aa	Known RBP	4.12	□□□□□ -1.75
SDH3	YKL141W	SEG1	Q04279	960 aa		4.12	□□□□□ -1.75
SDH3	YKL141W	MLP2	P40457	1679 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	SFB3	P38810	929 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	GAT1	P43574	510 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	UBC9	P50623	157 aa	Predicted RBP	4.11	□□□□□ -1.75
SDH3	YKL141W	ZIP2	P53061	704 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	ATG4	P53867	494 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	OSW1	Q08692	278 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	YBR182C-A	Q8TGU6	64 aa		4.11	□□□□□ -1.75
SDH3	YKL141W	GEA2	P39993	1459 aa	Known RBP	4.11	□□□□□ -1.75
SDH3	YKL141W	ULS1	Q08562	1619 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-H	O13535	1793 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-DR5	P0C2I2	1755 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-DR6	P0C2I3	1755 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-LR2	P0C2I5	1755 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-PR2	P0C2J0	1756 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-JR1	P47098	1755 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-ER1	Q03612	1755 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-GR2	Q12269	1755 aa		4.1	□□□□□ -1.75
SDH3	YKL141W	TY1B-OL	Q12273	1755 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms