RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W ZDS1P50111 915 aaKnown RBP3.13□□□□□ -1.91
MSL1YIR009W HUL5P53119 910 aa3.13□□□□□ -1.91
MSL1YIR009W SIR3P06701 978 aa3.12□□□□□ -1.91
MSL1YIR009W YIL166CP40445 542 aa3.12□□□□□ -1.91
MSL1YIR009W CCT7P42943 550 aaKnown RBP3.12□□□□□ -1.91
MSL1YIR009W IMO32P53219 342 aa3.12□□□□□ -1.91
MSL1YIR009W GAD1Q04792 585 aa3.12□□□□□ -1.91
MSL1YIR009W YDR338CQ05497 695 aa3.12□□□□□ -1.91
MSL1YIR009W TAF3Q12297 353 aa3.12□□□□□ -1.91
MSL1YIR009W ILV6P25605 309 aaKnown RBP3.11□□□□□ -1.91
MSL1YIR009W PER1P25625 357 aa3.11□□□□□ -1.91
MSL1YIR009W CCT3P39077 534 aaKnown RBP3.11□□□□□ -1.91
MSL1YIR009W NNF1P47149 201 aa3.11□□□□□ -1.91
MSL1YIR009W YAP1802P53309 568 aa3.11□□□□□ -1.91
MSL1YIR009W COQ11Q05892 277 aa3.11□□□□□ -1.91
MSL1YIR009W ARO10Q06408 635 aa3.11□□□□□ -1.91
MSL1YIR009W DMC1P25453 334 aa3.1□□□□□ -1.91
MSL1YIR009W ADY2P25613 283 aa3.1□□□□□ -1.91
MSL1YIR009W BRN1P38170 754 aa3.1□□□□□ -1.91
MSL1YIR009W OCA5P38738 679 aa3.1□□□□□ -1.91
MSL1YIR009W REV7P38927 245 aa3.1□□□□□ -1.91
MSL1YIR009W YJL206CP39529 758 aa3.1□□□□□ -1.91
MSL1YIR009W NDC80P40460 691 aa3.1□□□□□ -1.91
MSL1YIR009W SNM1P40993 198 aa3.1□□□□□ -1.91
MSL1YIR009W ALY2P47029 1046 aa3.1□□□□□ -1.91
MSL1YIR009W PRP31P49704 494 aaPredicted RBP3.1□□□□□ -1.91
MSL1YIR009W MTL1P53214 551 aa3.1□□□□□ -1.91
MSL1YIR009W PYC1P11154 1178 aaKnown RBP3.09□□□□□ -1.91
MSL1YIR009W GAL11P19659 1081 aa3.09□□□□□ -1.91
MSL1YIR009W ADE2P21264 571 aaKnown RBP3.09□□□□□ -1.91
MSL1YIR009W EMP70P32802 667 aa3.09□□□□□ -1.91
MSL1YIR009W APL2P36000 726 aaPredicted RBP3.09□□□□□ -1.91
MSL1YIR009W UBS1P38290 277 aa3.09□□□□□ -1.91
MSL1YIR009W YHR112CP38716 378 aa3.09□□□□□ -1.91
MSL1YIR009W FMO1P38866 432 aa3.09□□□□□ -1.91
MSL1YIR009W LYS9P38999 446 aa3.09□□□□□ -1.91
MSL1YIR009W PAN2P53010 1115 aaPredicted RBP3.09□□□□□ -1.91
MSL1YIR009W YBP2P53169 641 aa3.09□□□□□ -1.91
MSL1YIR009W YNL162W-AQ3E7A8 72 aa3.09□□□□□ -1.91
MSL1YIR009W YKL033W-AQ86ZR7 236 aa3.09□□□□□ -1.91
MSL1YIR009W MTC2P34246 357 aa3.08□□□□□ -1.92
MSL1YIR009W HRB1P38922 454 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
MSL1YIR009W FHN1P53279 174 aa3.08□□□□□ -1.92
MSL1YIR009W ARG5,6Q01217 863 aa3.08□□□□□ -1.92
MSL1YIR009W CTK1Q03957 528 aaKnown RBP3.08□□□□□ -1.92
MSL1YIR009W YLR149CQ99296 730 aa3.08□□□□□ -1.92
MSL1YIR009W MDM10P18409 493 aa3.07□□□□□ -1.92
MSL1YIR009W MVD1P32377 396 aaKnown RBP3.07□□□□□ -1.92
MSL1YIR009W SRP40P32583 406 aaPredicted RBP3.07□□□□□ -1.92
MSL1YIR009W PPG1P32838 368 aa3.07□□□□□ -1.92
MSL1YIR009W MCD4P36051 919 aa3.07□□□□□ -1.92
MSL1YIR009W TRZ1P36159 838 aaPredicted RBP3.07□□□□□ -1.92
MSL1YIR009W SFB3P38810 929 aa3.07□□□□□ -1.92
MSL1YIR009W NUP60P39705 539 aa3.07□□□□□ -1.92
MSL1YIR009W GDH3P39708 457 aa3.07□□□□□ -1.92
MSL1YIR009W BNA2P47125 453 aa3.07□□□□□ -1.92
MSL1YIR009W MAL11P53048 616 aa3.07□□□□□ -1.92
MSL1YIR009W APM1Q00776 475 aaPredicted RBP3.07□□□□□ -1.92
MSL1YIR009W NSE3Q05541 303 aa3.07□□□□□ -1.92
MSL1YIR009W RGC1Q06108 1083 aaKnown RBP3.07□□□□□ -1.92
MSL1YIR009W MCM21Q06675 368 aa3.07□□□□□ -1.92
MSL1YIR009W YOL098CQ12496 1037 aa3.07□□□□□ -1.92
MSL1YIR009W HRP1Q99383 534 aaKnown RBP3.07□□□□□ -1.92
MSL1YIR009W ERG6P25087 383 aaKnown RBP3.06□□□□□ -1.92
MSL1YIR009W YKL091CP33324 310 aaKnown RBP3.06□□□□□ -1.92
MSL1YIR009W PHO11P35842 467 aa3.06□□□□□ -1.92
MSL1YIR009W GLG1P36143 616 aa3.06□□□□□ -1.92
MSL1YIR009W PHO12P38693 467 aa3.06□□□□□ -1.92
MSL1YIR009W MIP6P38760 659 aaKnown RBP3.06□□□□□ -1.92
MSL1YIR009W BDH2P39713 417 aa3.06□□□□□ -1.92
MSL1YIR009W YEL020CP39994 560 aa3.06□□□□□ -1.92
MSL1YIR009W ARG2P40360 574 aa3.06□□□□□ -1.92
MSL1YIR009W CTR1P49573 406 aa3.06□□□□□ -1.92
MSL1YIR009W CDC53Q12018 815 aaKnown RBP3.06□□□□□ -1.92
MSL1YIR009W STI1P15705 589 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
MSL1YIR009W SPO11P23179 398 aa3.05□□□□□ -1.92
MSL1YIR009W RNH70P53331 553 aa3.05□□□□□ -1.92
MSL1YIR009W ATG4P53867 494 aa3.05□□□□□ -1.92
MSL1YIR009W ORC4P54791 529 aa3.05□□□□□ -1.92
MSL1YIR009W HMO1Q03973 246 aaKnown RBP3.05□□□□□ -1.92
MSL1YIR009W HOF1Q05080 669 aa3.05□□□□□ -1.92
MSL1YIR009W THI7Q05998 598 aa3.05□□□□□ -1.92
MSL1YIR009W FPR4Q06205 392 aaPredicted RBP3.05□□□□□ -1.92
MSL1YIR009W MLH3Q12083 715 aa3.05□□□□□ -1.92
MSL1YIR009W Q0142Q9ZZW4 58 aa3.05□□□□□ -1.92
MSL1YIR009W RPN13O13563 156 aa3.04□□□□□ -1.92
MSL1YIR009W ERR1P0CX10 437 aa3.04□□□□□ -1.92
MSL1YIR009W ERR2P0CX11 437 aa3.04□□□□□ -1.92
MSL1YIR009W APT2P36973 181 aa3.04□□□□□ -1.92
MSL1YIR009W GET2P40056 285 aa3.04□□□□□ -1.92
MSL1YIR009W YFL052WP43551 465 aa3.04□□□□□ -1.92
MSL1YIR009W THR1P17423 357 aaKnown RBP3.03□□□□□ -1.92
MSL1YIR009W MIH1P23748 554 aa3.03□□□□□ -1.92
MSL1YIR009W STO1P34160 861 aaKnown RBP3.03□□□□□ -1.92
MSL1YIR009W CHZ1P40019 153 aaPredicted RBP3.03□□□□□ -1.92
MSL1YIR009W GID8P40208 455 aa3.03□□□□□ -1.92
MSL1YIR009W CAF16P43569 289 aa3.03□□□□□ -1.92
MSL1YIR009W SNP1Q00916 300 aaPredicted RBP3.03□□□□□ -1.92
MSL1YIR009W AFT2Q08957 416 aa3.03□□□□□ -1.92
MSL1YIR009W MDM12Q92328 271 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms