RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W OSH3P38713 996 aaKnown RBP2.53□□□□□ -2
BRP1YGL007W FPR3P38911 411 aaKnown RBP2.53□□□□□ -2
BRP1YGL007W YAR028WP39548 234 aa2.53□□□□□ -2
BRP1YGL007W VAB2P40003 282 aa2.53□□□□□ -2
BRP1YGL007W YMR147WP40218 223 aaKnown RBP2.53□□□□□ -2
BRP1YGL007W IRC8P47046 822 aa2.53□□□□□ -2
BRP1YGL007W NUT1P53114 1132 aa2.53□□□□□ -2
BRP1YGL007W ENV11P53246 860 aa2.53□□□□□ -2
BRP1YGL007W EEB1Q02891 456 aa2.53□□□□□ -2
BRP1YGL007W ADI1Q03677 179 aa2.53□□□□□ -2
BRP1YGL007W YML037CQ03703 340 aa2.53□□□□□ -2
BRP1YGL007W POB3Q04636 552 aaKnown RBP2.53□□□□□ -2
BRP1YGL007W FLC1Q08967 793 aa2.53□□□□□ -2
BRP1YGL007W MCD1Q12158 566 aa2.53□□□□□ -2
BRP1YGL007W TY3A-GQ12173 290 aa2.53□□□□□ -2
BRP1YGL007W TAH18Q12181 623 aa2.53□□□□□ -2
BRP1YGL007W TY3A-IQ99219 290 aa2.53□□□□□ -2
BRP1YGL007W PDR18P53756 1333 aa2.52□□□□□ -2.01
BRP1YGL007W HEM13P11353 328 aaKnown RBP2.52□□□□□ -2.01
BRP1YGL007W PHO8P11491 566 aa2.52□□□□□ -2.01
BRP1YGL007W PUF4P25339 888 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
BRP1YGL007W CHS3P29465 1165 aa2.52□□□□□ -2.01
BRP1YGL007W PAH1P32567 862 aa2.52□□□□□ -2.01
BRP1YGL007W MYO3P36006 1272 aa2.52□□□□□ -2.01
BRP1YGL007W RFC1P38630 861 aaKnown RBP2.52□□□□□ -2.01
BRP1YGL007W GPB2P39717 880 aa2.52□□□□□ -2.01
BRP1YGL007W AFG3P39925 761 aa2.52□□□□□ -2.01
BRP1YGL007W MXR1P40029 184 aa2.52□□□□□ -2.01
BRP1YGL007W SOL4P53315 255 aa2.52□□□□□ -2.01
BRP1YGL007W ESC2Q06340 456 aa2.52□□□□□ -2.01
BRP1YGL007W PMT7Q06644 662 aa2.52□□□□□ -2.01
BRP1YGL007W ECM30Q06673 1274 aa2.52□□□□□ -2.01
BRP1YGL007W BRE1Q07457 700 aaKnown RBP2.52□□□□□ -2.01
BRP1YGL007W HRK1Q08732 759 aaKnown RBP2.52□□□□□ -2.01
BRP1YGL007W RTT10Q08924 1013 aa2.52□□□□□ -2.01
BRP1YGL007W ICL2Q12031 575 aa2.52□□□□□ -2.01
BRP1YGL007W SUT2Q12286 268 aa2.52□□□□□ -2.01
BRP1YGL007W RAD61Q99359 647 aa2.52□□□□□ -2.01
BRP1YGL007W RAD18P10862 487 aa2.51□□□□□ -2.01
BRP1YGL007W SSB1P11484 613 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W VMA2P16140 517 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W SAM2P19358 384 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W RPL8BP29453 256 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W PMI40P29952 429 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W PRO3P32263 286 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W THI4P32318 326 aa2.51□□□□□ -2.01
BRP1YGL007W EUG1P32474 517 aa2.51□□□□□ -2.01
BRP1YGL007W BCS1P32839 456 aa2.51□□□□□ -2.01
BRP1YGL007W DOM34P33309 386 aa2.51□□□□□ -2.01
BRP1YGL007W TGL1P34163 548 aa2.51□□□□□ -2.01
BRP1YGL007W MAL31P38156 614 aa2.51□□□□□ -2.01
BRP1YGL007W HSE1P38753 452 aa2.51□□□□□ -2.01
BRP1YGL007W RVS167P39743 482 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W YEN1P40028 759 aa2.51□□□□□ -2.01
BRP1YGL007W SSB2P40150 613 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W VID27P40157 782 aa2.51□□□□□ -2.01
BRP1YGL007W HNT2P49775 206 aa2.51□□□□□ -2.01
BRP1YGL007W YGR125WP53273 1036 aa2.51□□□□□ -2.01
BRP1YGL007W VPS62P53285 467 aa2.51□□□□□ -2.01
BRP1YGL007W HDA1P53973 706 aa2.51□□□□□ -2.01
BRP1YGL007W RPS15Q01855 142 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W NAN1Q02931 896 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W ROT1Q03691 256 aa2.51□□□□□ -2.01
BRP1YGL007W TMA64Q04600 565 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W DUS4Q06063 367 aa2.51□□□□□ -2.01
BRP1YGL007W NKP2Q06162 153 aa2.51□□□□□ -2.01
BRP1YGL007W RSC58Q07979 502 aa2.51□□□□□ -2.01
BRP1YGL007W NBA1Q08229 501 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W FAL1Q12099 399 aaKnown RBP2.51□□□□□ -2.01
BRP1YGL007W NTO1Q12311 748 aa2.51□□□□□ -2.01
BRP1YGL007W YGR161W-CQ3E744 92 aa2.51□□□□□ -2.01
BRP1YGL007W CYC1P00044 109 aaPredicted RBP2.5□□□□□ -2.01
BRP1YGL007W CAN1P04817 590 aa2.5□□□□□ -2.01
BRP1YGL007W NUC1P08466 329 aa2.5□□□□□ -2.01
BRP1YGL007W SRP54P20424 541 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W ACE2P21192 770 aa2.5□□□□□ -2.01
BRP1YGL007W UTR4P32626 227 aa2.5□□□□□ -2.01
BRP1YGL007W ANP1P32629 500 aa2.5□□□□□ -2.01
BRP1YGL007W ABD1P32783 436 aaPredicted RBP2.5□□□□□ -2.01
BRP1YGL007W RGT1P32862 1170 aa2.5□□□□□ -2.01
BRP1YGL007W RER2P35196 286 aa2.5□□□□□ -2.01
BRP1YGL007W DBP7P36120 742 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W VBA5P36172 582 aa2.5□□□□□ -2.01
BRP1YGL007W AAP1P37898 856 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W PHO88P38264 188 aaPredicted RBP2.5□□□□□ -2.01
BRP1YGL007W EXO5P38289 585 aa2.5□□□□□ -2.01
BRP1YGL007W NEM1P38757 446 aa2.5□□□□□ -2.01
BRP1YGL007W CRP1P38845 465 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W PEX28P38848 579 aa2.5□□□□□ -2.01
BRP1YGL007W PMC1P38929 1173 aaPredicted RBP2.5□□□□□ -2.01
BRP1YGL007W PES4P39684 611 aa2.5□□□□□ -2.01
BRP1YGL007W VPS8P39702 1274 aa2.5□□□□□ -2.01
BRP1YGL007W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
BRP1YGL007W GNP1P48813 663 aa2.5□□□□□ -2.01
BRP1YGL007W MNN10P50108 393 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W SCS3P53012 380 aa2.5□□□□□ -2.01
BRP1YGL007W MCM6P53091 1017 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W BRE5P53741 515 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W FOL1P53848 824 aa2.5□□□□□ -2.01
BRP1YGL007W PEX13P80667 386 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms