RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W ZDS1P50111 915 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W RAI1P53063 387 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W TAD1P53065 400 aa1.7□□□□□ -2.14
SMC1YFL008W ERP6P53198 216 aa1.7□□□□□ -2.14
SMC1YFL008W BRE5P53741 515 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W RPL8AP17076 256 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W HRB1P38922 454 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
SMC1YFL008W ZRG8P40021 1076 aa1.7□□□□□ -2.14
SMC1YFL008W RSC3Q06639 885 aa1.7□□□□□ -2.14
SMC1YFL008W NSI1Q12457 570 aa1.7□□□□□ -2.14
SMC1YFL008W FIG2P25653 1609 aa1.69□□□□□ -2.14
SMC1YFL008W YLR358CO13565 187 aa1.69□□□□□ -2.14
SMC1YFL008W LEU2P04173 364 aaPredicted RBP1.69□□□□□ -2.14
SMC1YFL008W SRD1P09007 221 aa1.69□□□□□ -2.14
SMC1YFL008W CDC26P14724 124 aa1.69□□□□□ -2.14
SMC1YFL008W SIC1P38634 284 aa1.69□□□□□ -2.14
SMC1YFL008W MAD1P40957 749 aa1.69□□□□□ -2.14
SMC1YFL008W YDR306CQ06640 478 aa1.69□□□□□ -2.14
SMC1YFL008W HRP1Q99383 534 aaKnown RBP1.69□□□□□ -2.14
SMC1YFL008W APL1P27351 700 aa1.69□□□□□ -2.14
SMC1YFL008W HIR1P32479 840 aa1.69□□□□□ -2.14
SMC1YFL008W GET2P40056 285 aa1.69□□□□□ -2.14
SMC1YFL008W MNN10P50108 393 aaKnown RBP1.69□□□□□ -2.14
SMC1YFL008W TMA10Q06177 86 aa1.69□□□□□ -2.14
SMC1YFL008W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SMC1YFL008W HSP60P19882 572 aaKnown RBP1.69□□□□□ -2.14
SMC1YFL008W RAD53P22216 821 aa1.69□□□□□ -2.14
SMC1YFL008W ATG19P35193 415 aa1.69□□□□□ -2.14
SMC1YFL008W FLO10P36170 1169 aa1.69□□□□□ -2.14
SMC1YFL008W CDS1P38221 457 aa1.69□□□□□ -2.14
SMC1YFL008W MIP6P38760 659 aaKnown RBP1.69□□□□□ -2.14
SMC1YFL008W SSZ1P38788 538 aaKnown RBP1.69□□□□□ -2.14
SMC1YFL008W CHZ1P40019 153 aaPredicted RBP1.69□□□□□ -2.14
SMC1YFL008W NUP82P40368 713 aa1.69□□□□□ -2.14
SMC1YFL008W GTF1P53260 183 aaPredicted RBP1.69□□□□□ -2.14
SMC1YFL008W YGR125WP53273 1036 aa1.69□□□□□ -2.14
SMC1YFL008W ALG12P53730 551 aa1.69□□□□□ -2.14
SMC1YFL008W DOS2P54858 310 aa1.69□□□□□ -2.14
SMC1YFL008W NTG2Q08214 380 aa1.69□□□□□ -2.14
SMC1YFL008W Q0142Q9ZZW4 58 aa1.69□□□□□ -2.14
SMC1YFL008W PMI40P29952 429 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W MNN4P36044 1178 aa1.68□□□□□ -2.14
SMC1YFL008W YKR051WP36142 418 aa1.68□□□□□ -2.14
SMC1YFL008W YHR112CP38716 378 aa1.68□□□□□ -2.14
SMC1YFL008W PFA3P42836 336 aa1.68□□□□□ -2.14
SMC1YFL008W YDL183CP48569 320 aa1.68□□□□□ -2.14
SMC1YFL008W DUR1,2P32528 1835 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W ADE2P21264 571 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W CCM1P48237 864 aaPredicted RBP1.68□□□□□ -2.14
SMC1YFL008W DUS1P53759 423 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W ORC4P54791 529 aa1.68□□□□□ -2.14
SMC1YFL008W NBA1Q08229 501 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W HSF1P10961 833 aa1.68□□□□□ -2.14
SMC1YFL008W EMP70P32802 667 aa1.68□□□□□ -2.14
SMC1YFL008W YKR018CP36114 725 aa1.68□□□□□ -2.14
SMC1YFL008W CCT7P42943 550 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W ALG2P43636 503 aa1.68□□□□□ -2.14
SMC1YFL008W SET2P46995 733 aaKnown RBP1.68□□□□□ -2.14
SMC1YFL008W NNF1P47149 201 aa1.68□□□□□ -2.14
SMC1YFL008W ZIP2P53061 704 aa1.68□□□□□ -2.14
SMC1YFL008W MUK1Q02866 612 aa1.68□□□□□ -2.14
SMC1YFL008W RSM24Q03976 319 aa1.68□□□□□ -2.14
SMC1YFL008W RXT3Q07458 294 aa1.68□□□□□ -2.14
SMC1YFL008W THS1P04801 734 aaKnown RBP1.67□□□□□ -2.14
SMC1YFL008W NAP1P25293 417 aaKnown RBP1.67□□□□□ -2.14
SMC1YFL008W BEM4P39011 633 aa1.67□□□□□ -2.14
SMC1YFL008W SAH1P39954 449 aaKnown RBP1.67□□□□□ -2.14
SMC1YFL008W BNA2P47125 453 aa1.67□□□□□ -2.14
SMC1YFL008W SNF12P53628 566 aa1.67□□□□□ -2.14
SMC1YFL008W TEX1P53851 422 aaKnown RBP1.67□□□□□ -2.14
SMC1YFL008W MET7Q08645 548 aa1.67□□□□□ -2.14
SMC1YFL008W TGL5Q12043 749 aa1.67□□□□□ -2.14
SMC1YFL008W TYE7P33122 291 aaPredicted RBP1.67□□□□□ -2.14
SMC1YFL008W AKL1P38080 1108 aaKnown RBP1.67□□□□□ -2.14
SMC1YFL008W MOH1P38191 138 aa1.67□□□□□ -2.14
SMC1YFL008W TIM54P47045 478 aa1.67□□□□□ -2.14
SMC1YFL008W MET13P53128 600 aa1.67□□□□□ -2.14
SMC1YFL008W FHN1P53279 174 aa1.67□□□□□ -2.14
SMC1YFL008W TGL2P54857 326 aa1.67□□□□□ -2.14
SMC1YFL008W ARG5,6Q01217 863 aa1.67□□□□□ -2.14
SMC1YFL008W ATG33Q06485 197 aa1.67□□□□□ -2.14
SMC1YFL008W OSW2Q12202 724 aa1.67□□□□□ -2.14
SMC1YFL008W PRP9P19736 530 aaKnown RBP1.67□□□□□ -2.14
SMC1YFL008W MPT5P39016 859 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SMC1YFL008W VHR1P40522 640 aa1.67□□□□□ -2.14
SMC1YFL008W CTF4Q01454 927 aa1.67□□□□□ -2.14
SMC1YFL008W UGO1Q03327 502 aa1.67□□□□□ -2.14
SMC1YFL008W Q0010Q9ZZX9 128 aa1.67□□□□□ -2.14
SMC1YFL008W YRO2P38079 344 aa1.66□□□□□ -2.14
SMC1YFL008W NUG1P40010 520 aaKnown RBP1.66□□□□□ -2.14
SMC1YFL008W YJR039WP47107 1121 aa1.66□□□□□ -2.14
SMC1YFL008W SPT20P50875 604 aa1.66□□□□□ -2.14
SMC1YFL008W DNM1P54861 757 aa1.66□□□□□ -2.14
SMC1YFL008W SRP1Q02821 542 aaKnown RBP1.66□□□□□ -2.14
SMC1YFL008W MPH2P0CD99 609 aa1.66□□□□□ -2.14
SMC1YFL008W DAL7P21826 554 aa1.66□□□□□ -2.14
SMC1YFL008W RPP1P38786 293 aa1.66□□□□□ -2.14
SMC1YFL008W CCT5P40413 562 aaKnown RBP1.66□□□□□ -2.14
SMC1YFL008W ADY4Q05955 493 aa1.66□□□□□ -2.14
SMC1YFL008W YOL073CQ08232 322 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms