RNA–Protein interactions for RNA: YDR137W

RGP1, Transcript of Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p), yeast

Gene RGP1, Length 1,992 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGP1	YDR137W	RKM3	P38222	552 aa		5.22	□□□□□ -1.57
RGP1	YDR137W	SPC72	P39723	622 aa		5.22	□□□□□ -1.57
RGP1	YDR137W	IRC5	P43610	853 aa		5.22	□□□□□ -1.57
RGP1	YDR137W	HFM1	P51979	1187 aa		5.22	□□□□□ -1.57
RGP1	YDR137W	PCL10	P53124	433 aa		5.22	□□□□□ -1.57
RGP1	YDR137W	ARC35	P53731	342 aa	Known RBP	5.22	□□□□□ -1.57
RGP1	YDR137W	CWC2	Q12046	339 aa	Predicted RBP	5.22	□□□□□ -1.57
RGP1	YDR137W	NOT3	P06102	836 aa	Known RBP	5.21	□□□□□ -1.58
RGP1	YDR137W	NGG1	P32494	702 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	XRS2	P33301	854 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	STE13	P33894	931 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	FLR1	P38124	548 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	SRP68	P38687	599 aa	Known RBP	5.21	□□□□□ -1.58
RGP1	YDR137W	BEM4	P39011	633 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	EAF5	P39995	279 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	RAD26	P40352	1085 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	CEP3	P40969	608 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	YFL052W	P43551	465 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	ZIP2	P53061	704 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	YKR011C	Q02209	353 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	XYL2	Q07993	356 aa		5.21	□□□□□ -1.58
RGP1	YDR137W	RPS4A	P0CX35	261 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	RPS4B	P0CX36	261 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	GLN4	P13188	809 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	SAM35	P14693	329 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	SAP190	P36123	1033 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	SAW1	P39735	261 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	BRE4	Q07660	1125 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	YPL277C	Q08989	487 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	OSW2	Q12202	724 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	CCZ1	P38273	704 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	STL1	P39932	569 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	VID28	P40547	921 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	UPF3	P48412	387 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	BRE5	P53741	515 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	NOP15	P53927	220 aa	Predicted RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	SDH1	Q00711	640 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	VIP1	Q06685	1146 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	RSC58	Q07979	502 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	NGL1	Q08213	363 aa	Known RBP	5.2	□□□□□ -1.58
RGP1	YDR137W	HAL9	Q12180	1030 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	YOR022C	Q12204	715 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	NSI1	Q12457	570 aa		5.2	□□□□□ -1.58
RGP1	YDR137W	PRC1	P00729	532 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	MTF2	P10849	440 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	TYE7	P33122	291 aa	Predicted RBP	5.19	□□□□□ -1.58
RGP1	YDR137W	SDS22	P36047	338 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	APM3	P38153	483 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	NOP16	P40007	231 aa	Known RBP	5.19	□□□□□ -1.58
RGP1	YDR137W	JJJ3	P47138	172 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	MTD1	Q02046	320 aa	Known RBP	5.19	□□□□□ -1.58
RGP1	YDR137W	SPC19	Q03954	165 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	SGD1	Q06132	899 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	TFC6	Q06339	672 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	GAS5	Q08193	484 aa		5.19	□□□□□ -1.58
RGP1	YDR137W	SAN1	P22470	610 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	SRO9	P25567	434 aa	Known RBP	5.18	□□□□□ -1.58
RGP1	YDR137W	MF(ALPHA)2	P32435	120 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	HXT4	P32467	576 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	YHR202W	P38887	602 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	MAD3	P47074	515 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	PSF3	Q12146	194 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	RPS9A	O13516	197 aa	Known RBP	5.18	□□□□□ -1.58
RGP1	YDR137W	ADH4	P10127	382 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	YCL049C	P25577	312 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	TGL1	P34163	548 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	LAM1	P38851	1228 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	KAP123	P40069	1113 aa	Known RBP	5.18	□□□□□ -1.58
RGP1	YDR137W	SMK1	P41808	388 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	VTC2	P43585	828 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	RAI1	P53063	387 aa	Known RBP	5.18	□□□□□ -1.58
RGP1	YDR137W	YLR407W	Q06070	228 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	SVS1	Q12254	260 aa		5.18	□□□□□ -1.58
RGP1	YDR137W	NCP1	P16603	691 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	SEG2	P34250	1132 aa		5.17	□□□□□ -1.58
RGP1	YDR137W	MUD2	P36084	527 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	AKL1	P38080	1108 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	MIP6	P38760	659 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	BCD1	P38772	366 aa		5.17	□□□□□ -1.58
RGP1	YDR137W	SWD1	P39706	426 aa		5.17	□□□□□ -1.58
RGP1	YDR137W	SCS2	P40075	244 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	SBE2	P42223	864 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	BFA1	P47113	574 aa		5.17	□□□□□ -1.58
RGP1	YDR137W	SGM1	P47166	707 aa		5.17	□□□□□ -1.58
RGP1	YDR137W	CPR6	P53691	371 aa	Known RBP	5.17	□□□□□ -1.58
RGP1	YDR137W	SNF1	P06782	633 aa	Known RBP	5.16	□□□□□ -1.58
RGP1	YDR137W	FBP1	P09201	348 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	TRK2	P28584	889 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	NUP120	P35729	1037 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	YHL012W	P38709	493 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	PUG1	P40100	303 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	GPD1	Q00055	391 aa	Known RBP	5.16	□□□□□ -1.58
RGP1	YDR137W	MRPL13	Q02204	264 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	VHS3	Q08438	674 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	YVC1	Q12324	675 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	MRP7	P12687	371 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
RGP1	YDR137W	RPD3	P32561	433 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	PAH1	P32567	862 aa		5.16	□□□□□ -1.58
RGP1	YDR137W	TFC3	P34111	1160 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms