RNA–Protein interactions for RNA: YDR003W

RCR2, Transcript of Vacuolar protein, yeast

Gene RCR2, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR2	YDR003W	RSC8	P43609	557 aa	Known RBP	4.93	□□□□□ -1.62
RCR2	YDR003W	ART5	P53244	586 aa	Known RBP	4.93	□□□□□ -1.62
RCR2	YDR003W	YGR125W	P53273	1036 aa		4.93	□□□□□ -1.62
RCR2	YDR003W	ECM16	Q04217	1267 aa	Known RBP	4.93	□□□□□ -1.62
RCR2	YDR003W	NOP14	Q99207	810 aa	Known RBP	4.93	□□□□□ -1.62
RCR2	YDR003W	UBR2	Q07963	1872 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	CAN1	P04817	590 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	GCR1	P07261	785 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	SEC6	P32844	805 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	YBR184W	P38299	523 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	MXR1	P40029	184 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	EST2	Q06163	884 aa		4.92	□□□□□ -1.62
RCR2	YDR003W	PMA1	P05030	918 aa	Known RBP	4.91	□□□□□ -1.62
RCR2	YDR003W	SEC23	P15303	768 aa	Known RBP	4.91	□□□□□ -1.62
RCR2	YDR003W	RAD53	P22216	821 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	HCM1	P25364	564 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	RAD27	P26793	382 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	MGM1	P32266	881 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	YSC84	P32793	468 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	KSP1	P38691	1029 aa	Known RBP	4.91	□□□□□ -1.62
RCR2	YDR003W	ACA1	P39970	489 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	PIC2	P40035	300 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	DUS4	Q06063	367 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	THI3	Q07471	609 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	OSH2	Q12451	1283 aa		4.91	□□□□□ -1.62
RCR2	YDR003W	TOR2	P32600	2474 aa	Known RBP	4.9	□□□□□ -1.62
RCR2	YDR003W	GAL11	P19659	1081 aa		4.9	□□□□□ -1.63
RCR2	YDR003W	STE5	P32917	917 aa		4.9	□□□□□ -1.63
RCR2	YDR003W	IRC4	Q03036	179 aa		4.9	□□□□□ -1.63
RCR2	YDR003W	SPO75	Q07798	868 aa		4.9	□□□□□ -1.63
RCR2	YDR003W	RTT10	Q08924	1013 aa		4.9	□□□□□ -1.63
RCR2	YDR003W	SPO21	Q12411	609 aa		4.9	□□□□□ -1.63
RCR2	YDR003W	HEM13	P11353	328 aa	Known RBP	4.89	□□□□□ -1.63
RCR2	YDR003W	KAR1	P11927	433 aa		4.89	□□□□□ -1.63
RCR2	YDR003W	RPL8A	P17076	256 aa	Known RBP	4.89	□□□□□ -1.63
RCR2	YDR003W	EEB1	Q02891	456 aa		4.89	□□□□□ -1.63
RCR2	YDR003W	TMA10	Q06177	86 aa		4.89	□□□□□ -1.63
RCR2	YDR003W	NTG2	Q08214	380 aa		4.89	□□□□□ -1.63
RCR2	YDR003W	NBA1	Q08229	501 aa	Known RBP	4.89	□□□□□ -1.63
RCR2	YDR003W	CIT1	P00890	479 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	HEM1	P09950	548 aa	Predicted RBP	4.88	□□□□□ -1.63
RCR2	YDR003W	HSP60	P19882	572 aa	Known RBP	4.88	□□□□□ -1.63
RCR2	YDR003W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RCR2	YDR003W	MRC1	P25588	1096 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	RPL8B	P29453	256 aa	Known RBP	4.88	□□□□□ -1.63
RCR2	YDR003W	BCS1	P32839	456 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	LST4	P34239	828 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
RCR2	YDR003W	ENV11	P53246	860 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RCR2	YDR003W	MRL1	Q06815	381 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	YDL121C	Q07541	149 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	PSF3	Q12146	194 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	YDR524C-B	Q3E6R4	66 aa		4.88	□□□□□ -1.63
RCR2	YDR003W	RPL40A	P0CH08	128 aa	Known RBP	4.87	□□□□□ -1.63
RCR2	YDR003W	RPL40B	P0CH09	128 aa	Known RBP	4.87	□□□□□ -1.63
RCR2	YDR003W	LCB1	P25045	558 aa	Known RBP	4.87	□□□□□ -1.63
RCR2	YDR003W	SFP1	P32432	683 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	ENT3	P47160	408 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	PHO23	P50947	330 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	PEX8	P53248	589 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	FCP1	Q03254	732 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	FMP25	Q08023	583 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	NTO1	Q12311	748 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	PTC5	Q12511	572 aa		4.87	□□□□□ -1.63
RCR2	YDR003W	COQ4	O13525	335 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	ARE1	P25628	610 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	MSH2	P25847	964 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	CDC20	P26309	610 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	KIP1	P28742	1111 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	EUG1	P32474	517 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	FUI1	P38196	639 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	RTA1	P53047	317 aa		4.86	□□□□□ -1.63
RCR2	YDR003W	TMA46	Q12000	345 aa	Known RBP	4.86	□□□□□ -1.63
RCR2	YDR003W	RPA135	P22138	1203 aa	Known RBP	4.85	□□□□□ -1.63
RCR2	YDR003W	TRX2	P22803	104 aa	Known RBP	4.85	□□□□□ -1.63
RCR2	YDR003W	ABD1	P32783	436 aa	Predicted RBP	4.85	□□□□□ -1.63
RCR2	YDR003W	RGT1	P32862	1170 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	DOM34	P33309	386 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	VBA5	P36172	582 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	YBL028C	P38202	106 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	CCZ1	P38273	704 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	SEC26	P41810	973 aa	Known RBP	4.85	□□□□□ -1.63
RCR2	YDR003W	TNA1	P53322	534 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	HOS3	Q02959	697 aa	Known RBP	4.85	□□□□□ -1.63
RCR2	YDR003W	EAF1	Q06337	982 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	ESC2	Q06340	456 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	YPL260W	Q08977	551 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	TMA17	Q12513	150 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	SWI1	P09547	1314 aa		4.85	□□□□□ -1.63
RCR2	YDR003W	GAL10	P04397	699 aa		4.84	□□□□□ -1.63
RCR2	YDR003W	AGP1	P25376	633 aa		4.84	□□□□□ -1.63
RCR2	YDR003W	PWP2	P25635	923 aa	Known RBP	4.84	□□□□□ -1.63
RCR2	YDR003W	VPS24	P36095	224 aa	Known RBP	4.84	□□□□□ -1.63
RCR2	YDR003W	ALG3	P38179	458 aa		4.84	□□□□□ -1.63
RCR2	YDR003W	CHS7	P38843	316 aa		4.84	□□□□□ -1.63
RCR2	YDR003W	GPB2	P39717	880 aa		4.84	□□□□□ -1.63
RCR2	YDR003W	RPN3	P40016	523 aa	Known RBP	4.84	□□□□□ -1.63
RCR2	YDR003W	HUL4	P40985	892 aa		4.84	□□□□□ -1.63
RCR2	YDR003W	YJR120W	P47157	116 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms