RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W REH1Q06709 432 aa2.55□□□□□ -2
SNF5YBR289W ACK1Q07622 623 aaPredicted RBP2.55□□□□□ -2
SNF5YBR289W HRP1Q99383 534 aaKnown RBP2.55□□□□□ -2
SNF5YBR289W KIN2P13186 1147 aaKnown RBP2.54□□□□□ -2
SNF5YBR289W HEM12P32347 362 aaPredicted RBP2.54□□□□□ -2
SNF5YBR289W MF(ALPHA)2P32435 120 aa2.54□□□□□ -2
SNF5YBR289W SIC1P38634 284 aa2.54□□□□□ -2
SNF5YBR289W YHR078WP38799 552 aa2.54□□□□□ -2
SNF5YBR289W SET5P38890 526 aaKnown RBP2.54□□□□□ -2
SNF5YBR289W BAP3P41815 604 aa2.54□□□□□ -2
SNF5YBR289W AVT1P47082 602 aa2.54□□□□□ -2
SNF5YBR289W PMT3P47190 753 aa2.54□□□□□ -2
SNF5YBR289W YDL183CP48569 320 aa2.54□□□□□ -2
SNF5YBR289W PCL10P53124 433 aa2.54□□□□□ -2
SNF5YBR289W TPO2P53283 614 aa2.54□□□□□ -2
SNF5YBR289W STP4Q07351 490 aa2.54□□□□□ -2
SNF5YBR289W YOR378WQ08902 515 aa2.54□□□□□ -2
SNF5YBR289W LIP5P32875 414 aa2.54□□□□□ -2
SNF5YBR289W HSL7P38274 827 aa2.54□□□□□ -2
SNF5YBR289W RET2P43621 546 aa2.54□□□□□ -2
SNF5YBR289W ALY2P47029 1046 aa2.54□□□□□ -2
SNF5YBR289W ECL1P48235 211 aa2.54□□□□□ -2
SNF5YBR289W ENA1P13587 1091 aa2.53□□□□□ -2
SNF5YBR289W GAS1P22146 559 aaKnown RBP2.53□□□□□ -2
SNF5YBR289W ATG19P35193 415 aa2.53□□□□□ -2
SNF5YBR289W POA1P38218 177 aa2.53□□□□□ -2
SNF5YBR289W SAK1P38990 1142 aa2.53□□□□□ -2
SNF5YBR289W YNL195CP40168 261 aa2.53□□□□□ -2
SNF5YBR289W MNN11P46985 422 aaKnown RBP2.53□□□□□ -2
SNF5YBR289W HLJ1P48353 224 aa2.53□□□□□ -2
SNF5YBR289W PHO23P50947 330 aa2.53□□□□□ -2
SNF5YBR289W ARG5,6Q01217 863 aa2.53□□□□□ -2
SNF5YBR289W ENA2Q01896 1091 aa2.53□□□□□ -2
SNF5YBR289W YLR407WQ06070 228 aa2.53□□□□□ -2
SNF5YBR289W GUD1Q07729 489 aa2.53□□□□□ -2
SNF5YBR289W ENA5Q12691 1091 aa2.53□□□□□ -2
SNF5YBR289W GLN4P13188 809 aaKnown RBP2.53□□□□□ -2
SNF5YBR289W PRP19P32523 503 aaKnown RBP2.53□□□□□ -2
SNF5YBR289W DUG1P43616 481 aaKnown RBP2.53□□□□□ -2
SNF5YBR289W NIT3P49954 291 aa2.53□□□□□ -2
SNF5YBR289W TEX1P53851 422 aaKnown RBP2.53□□□□□ -2
SNF5YBR289W CEG1Q01159 459 aaPredicted RBP2.53□□□□□ -2
SNF5YBR289W CRR1Q05790 422 aa2.53□□□□□ -2
SNF5YBR289W TGL5Q12043 749 aa2.53□□□□□ -2
SNF5YBR289W PMA1P05030 918 aaKnown RBP2.52□□□□□ -2.01
SNF5YBR289W GSY1P23337 708 aa2.52□□□□□ -2.01
SNF5YBR289W IRC5P43610 853 aa2.52□□□□□ -2.01
SNF5YBR289W SET2P46995 733 aaKnown RBP2.52□□□□□ -2.01
SNF5YBR289W CIA1Q05583 330 aa2.52□□□□□ -2.01
SNF5YBR289W ECM38Q05902 660 aaPredicted RBP2.52□□□□□ -2.01
SNF5YBR289W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SNF5YBR289W DIF1O13577 133 aa2.52□□□□□ -2.01
SNF5YBR289W PRC1P00729 532 aa2.52□□□□□ -2.01
SNF5YBR289W RFA1P22336 621 aaKnown RBP2.52□□□□□ -2.01
SNF5YBR289W MRC1P25588 1096 aa2.52□□□□□ -2.01
SNF5YBR289W YKU70P32807 602 aa2.52□□□□□ -2.01
SNF5YBR289W TOD6P34219 525 aa2.52□□□□□ -2.01
SNF5YBR289W HRB1P38922 454 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SNF5YBR289W RPT2P40327 437 aaKnown RBP2.52□□□□□ -2.01
SNF5YBR289W PUS4P48567 403 aaKnown RBP2.52□□□□□ -2.01
SNF5YBR289W NOP15P53927 220 aaPredicted RBP2.52□□□□□ -2.01
SNF5YBR289W ORC4P54791 529 aa2.52□□□□□ -2.01
SNF5YBR289W SND1Q04007 877 aa2.52□□□□□ -2.01
SNF5YBR289W RPN7Q06103 429 aaKnown RBP2.52□□□□□ -2.01
SNF5YBR289W YOL057WQ08225 711 aa2.52□□□□□ -2.01
SNF5YBR289W YTM1Q12024 460 aaPredicted RBP2.52□□□□□ -2.01
SNF5YBR289W IMG2P25642 146 aaPredicted RBP2.51□□□□□ -2.01
SNF5YBR289W TFC4P33339 1025 aa2.51□□□□□ -2.01
SNF5YBR289W RPP1P38786 293 aa2.51□□□□□ -2.01
SNF5YBR289W IES5P40060 125 aa2.51□□□□□ -2.01
SNF5YBR289W NIT1P40447 199 aa2.51□□□□□ -2.01
SNF5YBR289W BUD8P41698 603 aa2.51□□□□□ -2.01
SNF5YBR289W VPS36Q06696 566 aa2.51□□□□□ -2.01
SNF5YBR289W YLR415CO13578 112 aa2.51□□□□□ -2.01
SNF5YBR289W TRP4P07285 380 aaPredicted RBP2.51□□□□□ -2.01
SNF5YBR289W SFP1P32432 683 aa2.51□□□□□ -2.01
SNF5YBR289W YHR202WP38887 602 aa2.51□□□□□ -2.01
SNF5YBR289W MAD2P40958 196 aa2.51□□□□□ -2.01
SNF5YBR289W NOP9P47077 666 aaKnown RBP2.51□□□□□ -2.01
SNF5YBR289W YJR008WP47085 338 aa2.51□□□□□ -2.01
SNF5YBR289W FOL2P51601 243 aaKnown RBP2.51□□□□□ -2.01
SNF5YBR289W RTK1Q12100 620 aaPredicted RBP2.51□□□□□ -2.01
SNF5YBR289W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SNF5YBR289W RIM8P53179 542 aa2.5□□□□□ -2.01
SNF5YBR289W MTL1P53214 551 aa2.5□□□□□ -2.01
SNF5YBR289W MOT3P54785 490 aaKnown RBP2.5□□□□□ -2.01
SNF5YBR289W SVL3Q03088 825 aaKnown RBP2.5□□□□□ -2.01
SNF5YBR289W FAP7Q12055 197 aaPredicted RBP2.5□□□□□ -2.01
SNF5YBR289W DIN7Q12086 430 aa2.5□□□□□ -2.01
SNF5YBR289W MSS18P08593 268 aa2.5□□□□□ -2.01
SNF5YBR289W DEF1P35732 738 aaKnown RBP2.5□□□□□ -2.01
SNF5YBR289W EAF5P39995 279 aa2.5□□□□□ -2.01
SNF5YBR289W RSC8P43609 557 aaKnown RBP2.5□□□□□ -2.01
SNF5YBR289W NPY1P53164 384 aa2.5□□□□□ -2.01
SNF5YBR289W CLU1Q03690 1277 aaKnown RBP2.5□□□□□ -2.01
SNF5YBR289W TMA10Q06177 86 aa2.5□□□□□ -2.01
SNF5YBR289W RXT3Q07458 294 aa2.5□□□□□ -2.01
SNF5YBR289W APA1P16550 321 aaKnown RBP2.49□□□□□ -2.01
SNF5YBR289W PRE4P30657 266 aa2.49□□□□□ -2.01
SNF5YBR289W HIR1P32479 840 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms