RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 ADCK5Q3MIX3 580 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 PARP10Q53GL7 1025 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 SUSD4Q5VX71 490 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 LDHAL6AQ6ZMR3 332 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
CASC19-230ENST00000641421 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
CASC19-230ENST00000641421 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
CASC19-230ENST00000641421 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
CASC19-230ENST00000641421 CPA1P15085 419 aa12.77□□□□□ -0.37
CASC19-230ENST00000641421 ADORA1P30542 326 aa12.77□□□□□ -0.37
CASC19-230ENST00000641421 ATP2B3Q16720 1220 aa12.77□□□□□ -0.37
CASC19-230ENST00000641421 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
CASC19-230ENST00000641421 HELLSQ9NRZ9 838 aa12.77□□□□□ -0.37
CASC19-230ENST00000641421 PKP1Q13835 747 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 CCDC129Q6ZRS4 1044 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
CASC19-230ENST00000641421 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
CASC19-230ENST00000641421 USP21Q9UK80 565 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
CASC19-230ENST00000641421 MYH3P11055 1940 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
CASC19-230ENST00000641421 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 RNF113AO15541 343 aaKnown RBP12.75□□□□□ -0.37
CASC19-230ENST00000641421 CHGBP05060 677 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
CASC19-230ENST00000641421 KRT32Q14532 448 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 LRRFIP1Q32MZ4 808 aaKnown RBP12.75□□□□□ -0.37
CASC19-230ENST00000641421 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
CASC19-230ENST00000641421 BRD1O95696 1058 aa12.74□□□□□ -0.37
CASC19-230ENST00000641421 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
CASC19-230ENST00000641421 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
CASC19-230ENST00000641421 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
CASC19-230ENST00000641421 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
CASC19-230ENST00000641421 SH2B1Q9NRF2 756 aaPredicted RBP12.74□□□□□ -0.37
CASC19-230ENST00000641421 NIP7Q9Y221 180 aaKnown RBP eCLIP12.74□□□□□ -0.37
CASC19-230ENST00000641421 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
CASC19-230ENST00000641421 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
CASC19-230ENST00000641421 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
CASC19-230ENST00000641421 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
CASC19-230ENST00000641421 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CASC19-230ENST00000641421 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
CASC19-230ENST00000641421 ALDH8A1Q9H2A2 487 aaPredicted RBP12.73□□□□□ -0.37
CASC19-230ENST00000641421 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
CASC19-230ENST00000641421 MYH14Q7Z406 1995 aaKnown RBP12.73□□□□□ -0.37
CASC19-230ENST00000641421 MROH5Q6ZUA9 1318 aa12.73□□□□□ -0.37
CASC19-230ENST00000641421 LRP5O75197 1615 aa12.73□□□□□ -0.37
CASC19-230ENST00000641421 NTSR2O95665 410 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
CASC19-230ENST00000641421 RPS6KB1P23443 525 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 PDE8BO95263 885 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 LARGE1O95461 756 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 ZAP70P43403 619 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 SCARF1Q14162 830 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
CASC19-230ENST00000641421 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
CASC19-230ENST00000641421 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
CASC19-230ENST00000641421 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
CASC19-230ENST00000641421 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
CASC19-230ENST00000641421 MAST3O60307 1309 aa12.71□□□□□ -0.37
CASC19-230ENST00000641421 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
CASC19-230ENST00000641421 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.38
CASC19-230ENST00000641421 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.38
CASC19-230ENST00000641421 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.38
CASC19-230ENST00000641421 CCDC83Q8IWF9 413 aa12.71□□□□□ -0.38
CASC19-230ENST00000641421 RTL9Q8NET4 1388 aa12.71□□□□□ -0.38
CASC19-230ENST00000641421 BCORQ6W2J9 1755 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 M0R2C6 588 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 RGL2O15211 777 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 SLC5A1P13866 664 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 LPIN2Q92539 896 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 TPCN1Q9ULQ1 816 aa12.7□□□□□ -0.38
CASC19-230ENST00000641421 CYP21A2P08686 494 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 FGFR2P21802 821 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 IGHMBP2P38935 993 aaKnown RBP12.69□□□□□ -0.38
CASC19-230ENST00000641421 MCAMP43121 646 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 KCNQ4P56696 695 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
CASC19-230ENST00000641421 ME3Q16798 604 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
CASC19-230ENST00000641421 L1TD1Q5T7N2 865 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms