RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MCTP1Q6DN14 999 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 GIGYF2Q6Y7W6 1299 aaKnown RBP6.54□□□□□ -1.36
CHD2-227ENST00000637572 ZNF804AQ7Z570 1209 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 WASF1Q92558 559 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 LOC102724428A0A0B4J2F2 783 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 CCDC196A0A1B0GTZ2 297 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 PDE1AP54750 535 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 SIK1P57059 783 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 C1QTNF8P60827 252 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 NAPBQ9H115 298 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 RAD50Q92878 1312 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 CARNS1A5YM72 827 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 CCDC69A6NI79 296 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 K7ELQ4 463 aaPredicted RBP6.53□□□□□ -1.36
CHD2-227ENST00000637572 EYA2O00167 538 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
CHD2-227ENST00000637572 TRAK2O60296 914 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
CHD2-227ENST00000637572 CCDC178Q5BJE1 867 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 FBXO22Q8NEZ5 403 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 SH2B1Q9NRF2 756 aaPredicted RBP6.53□□□□□ -1.36
CHD2-227ENST00000637572 ERVV-1B6SEH8 477 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 RLBP1P12271 317 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 CHAF1AQ13111 956 aaPredicted RBP6.53□□□□□ -1.36
CHD2-227ENST00000637572 TMEM106CQ9BVX2 250 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 HEG1Q9ULI3 1381 aa6.53□□□□□ -1.36
CHD2-227ENST00000637572 MED1Q15648 1581 aaPredicted RBP6.52□□□□□ -1.36
CHD2-227ENST00000637572 IGHDP01880 384 aa6.52□□□□□ -1.36
CHD2-227ENST00000637572 A1BGP04217 495 aa6.52□□□□□ -1.36
CHD2-227ENST00000637572 GNAT2P19087 354 aa6.52□□□□□ -1.36
CHD2-227ENST00000637572 RBM5P52756 815 aaKnown RBP eCLIP6.52□□□□□ -1.36
CHD2-227ENST00000637572 ANAPC15P60006 121 aa6.52□□□□□ -1.36
CHD2-227ENST00000637572 G2E3Q7L622 706 aa6.52□□□□□ -1.36
CHD2-227ENST00000637572 PDRG1Q9NUG6 133 aa6.52□□□□□ -1.36
CHD2-227ENST00000637572 PLCG2P16885 1265 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 FARP1Q9Y4F1 1045 aaPredicted RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 MAP3K15Q6ZN16 1313 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 EPB41L2O43491 1005 aaKnown RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 PCCAP05165 728 aaPredicted RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 USP5P45974 858 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 EZH2Q15910 746 aaKnown RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 ZNF622Q969S3 477 aaKnown RBP eCLIP6.52□□□□□ -1.371e-7■■□□□ 14.4
CHD2-227ENST00000637572 BICC1Q9H694 974 aaKnown RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 MST1RQ04912 1400 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 POLR1AO95602 1720 aaPredicted RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 NEURL1BA8MQ27 555 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 ZNF213O14771 459 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 ABL2P42684 1182 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 VPS72Q15906 364 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 IQCA1Q86XH1 822 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 NLGN1Q8N2Q7 840 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 JMYQ8N9B5 988 aa6.52□□□□□ -1.37
CHD2-227ENST00000637572 ZNF396Q96N95 335 aaPredicted RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 DDX49Q9Y6V7 483 aaKnown RBP6.52□□□□□ -1.37
CHD2-227ENST00000637572 MROH5Q6ZUA9 1318 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 WDR33Q9C0J8 1336 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 PRKAR2AP13861 404 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 RRP12Q5JTH9 1297 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 TMC4Q7Z404 712 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 TMC2Q8TDI7 906 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 AKT1S1Q96B36 256 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 JAKMIP1Q96N16 626 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 HDAC9Q9UKV0 1011 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 GOLIM4O00461 696 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 ZBTB38Q8NAP3 1195 aaPredicted RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 CRNKL1Q9BZJ0 848 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 MBD3O95983 291 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 SUPT20HQ8NEM7 779 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 ZC3H12CQ9C0D7 883 aaKnown RBP6.51□□□□□ -1.37
CHD2-227ENST00000637572 EMILIN3Q9NT22 766 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 DENND2AQ9ULE3 1009 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 USP16Q9Y5T5 823 aa6.51□□□□□ -1.37
CHD2-227ENST00000637572 POLR3DP05423 398 aaPredicted RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 ALDH1B1P30837 517 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 BEND3Q5T5X7 828 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 VPS53Q5VIR6 699 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 CLEC4GQ6UXB4 293 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 CCDC73Q6ZRK6 1079 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 AXIN2Q9Y2T1 843 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 UBR1Q8IWV7 1749 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 C3P01024 1663 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 CYP27B1O15528 508 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 PDE4BQ07343 736 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 ZSCAN29Q8IWY8 852 aaPredicted RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 TSC1Q92574 1164 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 CALR3Q96L12 384 aaKnown RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 CNNM2Q9H8M5 875 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 ARHGEF28Q8N1W1 1705 aaKnown RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 MYO1BO43795 1136 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 HLA-DOAP06340 250 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 ITGA6P23229 1130 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 PDE6BP35913 854 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 HMGN5P82970 282 aaKnown RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 TBC1D9Q6ZT07 1266 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 281.8 ms