RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ZNF454Q8N9F8 522 aa6.35□□□□□ -1.39
LINC00550-201ENST00000629293 GPR153Q6NV75 609 aa6.35□□□□□ -1.39
LINC00550-201ENST00000629293 TAOK3Q9H2K8 898 aa6.35□□□□□ -1.39
LINC00550-201ENST00000629293 PRKRIP1Q9H875 184 aaPredicted RBP6.35□□□□□ -1.39
LINC00550-201ENST00000629293 IGSF5Q9NSI5 407 aa6.35□□□□□ -1.39
LINC00550-201ENST00000629293 PALM3A6NDB9 673 aaPredicted RBP6.34□□□□□ -1.39
LINC00550-201ENST00000629293 HOXA2O43364 376 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 KCNQ3O43525 872 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 PRR5LQ6MZQ0 368 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 ZNF790Q6PG37 636 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 NBPF5PQ86XG9 351 aaPredicted RBP6.34□□□□□ -1.39
LINC00550-201ENST00000629293 PDE6BP35913 854 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 DZIP3Q86Y13 1208 aaKnown RBP6.34□□□□□ -1.39
LINC00550-201ENST00000629293 PRR7Q8TB68 274 aa6.34□□□□□ -1.39
LINC00550-201ENST00000629293 BTBD11A6QL63 1104 aa6.34□□□□□ -1.4
LINC00550-201ENST00000629293 GNAT3A8MTJ3 354 aa6.34□□□□□ -1.4
LINC00550-201ENST00000629293 EIF5P55010 431 aaKnown RBP6.34□□□□□ -1.4
LINC00550-201ENST00000629293 ST5P78524 1137 aa6.34□□□□□ -1.4
LINC00550-201ENST00000629293 PRPF40BQ6NWY9 871 aaKnown RBP6.34□□□□□ -1.4
LINC00550-201ENST00000629293 NUDT18Q6ZVK8 323 aa6.34□□□□□ -1.4
LINC00550-201ENST00000629293 IL17REQ8NFR9 667 aa6.34□□□□□ -1.4
LINC00550-201ENST00000629293 A0A087WZG4 1122 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 PRAMEF22A3QJZ6 481 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 SEC24BO95487 1268 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 SLC39A7Q92504 469 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 RTF1Q92541 710 aaKnown RBP6.33□□□□□ -1.4
LINC00550-201ENST00000629293 FMNL2Q96PY5 1086 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 CFAP99D6REC4 459 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 NUDT7P0C024 238 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 U2AF1L5P0DN76 240 aaPredicted RBP6.33□□□□□ -1.4
LINC00550-201ENST00000629293 PRKAR2BP31323 418 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 U2AF1Q01081 240 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00550-201ENST00000629293 GUCA2AQ02747 115 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 NOM1Q5C9Z4 860 aaKnown RBP6.33□□□□□ -1.4
LINC00550-201ENST00000629293 MCM10Q7L590 875 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 JMYQ8N9B5 988 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 BRIP1Q9BX63 1249 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 ZNF277Q9NRM2 450 aaPredicted RBP6.33□□□□□ -1.4
LINC00550-201ENST00000629293 USP16Q9Y5T5 823 aa6.33□□□□□ -1.4
LINC00550-201ENST00000629293 UNCXA6NJT0 531 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 CCDC184Q52MB2 194 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 GAS2L2Q8NHY3 880 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 MIS18AQ9NYP9 233 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 PDE4DIPQ5VU43 2346 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 DDX11L8A8MPP1 907 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 PHLDB3Q6NSJ2 640 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 PHACTR3Q96KR7 559 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 NIP7Q9Y221 180 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00550-201ENST00000629293 POTECB2RU33 542 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 C7P10643 843 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 RBM25P49756 843 aaKnown RBP6.32□□□□□ -1.4
LINC00550-201ENST00000629293 LRRN4Q8WUT4 740 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 CNKSR1Q969H4 720 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 METRNQ9UJH8 293 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 GJA3Q9Y6H8 435 aa6.32□□□□□ -1.4
LINC00550-201ENST00000629293 ATG7O95352 703 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 DNAJB2P25686 324 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 GCGRP47871 477 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 TEX13AQ9BXU3 409 aaPredicted RBP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 RNF123Q5XPI4 1314 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 HEG1Q9ULI3 1381 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 SLC10A3P09131 477 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 IL6STP40189 918 aaPredicted RBP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 MAP1SQ66K74 1059 aaPredicted RBP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 SND1Q7KZF4 910 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 GNEQ9Y223 722 aaKnown RBP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 RRP7AQ9Y3A4 280 aaKnown RBP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 ANKRD26Q9UPS8 1709 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 RFX1P22670 979 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 AIDAQ96BJ3 306 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 MASTLQ96GX5 879 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 CFAP53Q96M91 514 aa6.31□□□□□ -1.4
LINC00550-201ENST00000629293 ABT1Q9ULW3 272 aaKnown RBP6.31□□□□□ -1.4
LINC00550-201ENST00000629293 ZC3H4Q9UPT8 1303 aaKnown RBP6.3□□□□□ -1.4
LINC00550-201ENST00000629293 COL5A3P25940 1745 aaPredicted RBP6.3□□□□□ -1.4
LINC00550-201ENST00000629293 WDR90Q96KV7 1748 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 KIAA1551Q9HCM1 1747 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 KDM4AO75164 1064 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 CAMTA2O94983 1202 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 SRGNP10124 158 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 GPTP24298 496 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 ARSIQ5FYB1 569 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 NUTM1Q86Y26 1132 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 SULF1Q8IWU6 871 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 TATDN2Q93075 761 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 ZNF652Q9Y2D9 606 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 MAFBQ9Y5Q3 323 aaPredicted RBP6.3□□□□□ -1.4
LINC00550-201ENST00000629293 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 KIF13BQ9NQT8 1826 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 WASHC4Q2M389 1173 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 CCDC93Q567U6 631 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 TPTE2Q6XPS3 522 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 ZBTB3Q9H5J0 574 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 NUDCQ9Y266 331 aa6.3□□□□□ -1.4
LINC00550-201ENST00000629293 IQCA1LA6NCM1 817 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 564.9 ms