RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ZNF213O14771 459 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
PKP4-217ENST00000628904 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 RRAGDQ9NQL2 400 aaPredicted RBP8.88□□□□□ -0.99
PKP4-217ENST00000628904 LMBRD1Q9NUN5 540 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 MEGF6O75095 1541 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 PHKA1P46020 1223 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 BCAMP50895 628 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 MAGEB6Q8N7X4 407 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 SDF4Q9BRK5 362 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 STAP2Q9UGK3 403 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 NRXN3Q9Y4C0 1643 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 ADGRB2O60241 1585 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 CEMIPQ8WUJ3 1361 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 G3V3G9 751 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 GNPATO15228 680 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
PKP4-217ENST00000628904 DCAF8Q5TAQ9 597 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 CARD10Q9BWT7 1032 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 F8W031 263 aaPredicted RBP8.87□□□□□ -0.99
PKP4-217ENST00000628904 CYP21A2P08686 494 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 KLHL40Q2TBA0 621 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 GPR101Q96P66 508 aaPredicted RBP8.87□□□□□ -0.99
PKP4-217ENST00000628904 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
PKP4-217ENST00000628904 PPP1R1BQ9UD71 204 aaPredicted RBP8.87□□□□□ -0.99
PKP4-217ENST00000628904 UBR1Q8IWV7 1749 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 KLF18A0A0U1RQI7 1052 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 GYG1P46976 350 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 KRT85P78386 507 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 IMMTQ16891 758 aaKnown RBP8.86□□□□□ -0.99
PKP4-217ENST00000628904 CCDC191Q8NCU4 936 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 NAPBQ9H115 298 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 TSPY26PQ9H489 355 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 ARMT1Q9H993 441 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 SRP68Q9UHB9 627 aaKnown RBP8.86□□□□□ -0.99
PKP4-217ENST00000628904 DENND2AQ9ULE3 1009 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 UTRNP46939 3433 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 RANBP6O60518 1105 aaKnown RBP8.86□□□□□ -0.99
PKP4-217ENST00000628904 ZPR1O75312 459 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 KIF20BQ96Q89 1820 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 KIF13AQ9H1H9 1805 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 B4E1Z4 1266 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 DHX16O60231 1041 aaKnown RBP8.86□□□□□ -0.99
PKP4-217ENST00000628904 U3KPZ7 1027 aaPredicted RBP8.86□□□□□ -0.99
PKP4-217ENST00000628904 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 AK9Q5TCS8 1911 aa8.86□□□□□ -0.99
PKP4-217ENST00000628904 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 NBPF5PQ86XG9 351 aaPredicted RBP8.85□□□□□ -0.99
PKP4-217ENST00000628904 C17orf53Q8N3J3 647 aaPredicted RBP8.85□□□□□ -0.99
PKP4-217ENST00000628904 PUS7LQ9H0K6 701 aaKnown RBP8.85□□□□□ -0.99
PKP4-217ENST00000628904 R3HCC1Q9Y3T6 440 aaKnown RBP8.85□□□□□ -0.99
PKP4-217ENST00000628904 LOC102724428A0A0B4J2F2 783 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 BECN2A8MW95 431 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 ERVV-2B6SEH9 535 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 F13A1P00488 732 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 MARCKSP29966 332 aaPredicted RBP8.85□□□□□ -0.99
PKP4-217ENST00000628904 CRKLP46109 303 aaKnown RBP8.85□□□□□ -0.99
PKP4-217ENST00000628904 SIK1P57059 783 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 KBTBD3Q8NAB2 608 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 PHKBQ93100 1093 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 OSBP2Q969R2 916 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.85□□□□□ -0.992e-6■■■□□ 14.6
PKP4-217ENST00000628904 AKAP2Q9Y2D5 859 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 ESPNB1AK53 854 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 GPAA1O43292 621 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 ATP2B2Q01814 1243 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 ZNF592Q92610 1267 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
PKP4-217ENST00000628904 SDR42E1Q8WUS8 393 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 COPRSQ9NQ92 184 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 DACT1Q9NYF0 836 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 FER1L4A9Z1Z3 1794 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 KIF24Q5T7B8 1368 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 M0R2C6 588 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 RNF113AO15541 343 aaKnown RBP8.84□□□□□ -0.99
PKP4-217ENST00000628904 PRKAB2O43741 272 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 ANAPC15P60006 121 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 RBM10P98175 930 aaKnown RBP8.84□□□□□ -0.99
PKP4-217ENST00000628904 STK38Q15208 465 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 RASSF8Q8NHQ8 419 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 C3P01024 1663 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 IFIT3O14879 490 aaKnown RBP8.84□□□□□ -0.99
PKP4-217ENST00000628904 KDM6AO15550 1401 aaPredicted RBP8.84□□□□□ -0.99
PKP4-217ENST00000628904 PRC1O43663 620 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 MBD4O95243 580 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 MBD3O95983 291 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 SPECC1Q5M775 1068 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 SUSD4Q5VX71 490 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 PDILTQ8N807 584 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 UTP14AQ9BVJ6 771 aaKnown RBP8.84□□□□□ -0.99
PKP4-217ENST00000628904 PEAK1Q9H792 1746 aa8.84□□□□□ -0.99
PKP4-217ENST00000628904 ITSN1Q15811 1721 aa8.84□□□□□ -1
PKP4-217ENST00000628904 HSPD1P10809 573 aaKnown RBP8.83□□□□□ -1
PKP4-217ENST00000628904 ATP5JP18859 108 aa8.83□□□□□ -1
PKP4-217ENST00000628904 PTMSP20962 102 aa8.83□□□□□ -1
PKP4-217ENST00000628904 CYP7A1P22680 504 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms