RNA–Protein interactions for RNA: ENST00000622991.1

PCDHB6-202, Transcript of protocadherin beta 6, humanhuman

TSL 2 BASIC

Gene PCDHB6, Length 2,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-202ENST00000622991 ADCK5Q3MIX3 580 aa19.23■□□□□ 0.67
PCDHB6-202ENST00000622991 TNPO1Q92973 898 aaKnown RBP19.23■□□□□ 0.67
PCDHB6-202ENST00000622991 GJD4Q96KN9 370 aaPredicted RBP19.23■□□□□ 0.67
PCDHB6-202ENST00000622991 PKP1Q13835 747 aa19.22■□□□□ 0.67
PCDHB6-202ENST00000622991 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
PCDHB6-202ENST00000622991 NIP7Q9Y221 180 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCDHB6-202ENST00000622991 AFF2P51816 1311 aa19.22■□□□□ 0.67
PCDHB6-202ENST00000622991 CCDC129Q6ZRS4 1044 aa19.22■□□□□ 0.67
PCDHB6-202ENST00000622991 HIP1O00291 1037 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 NECTIN1Q15223 517 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 RBM8AQ9Y5S9 174 aaKnown RBP19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 TAF6LQ9Y6J9 622 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 ANKRD18BA2A2Z9 1011 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 RAB3GAP1Q15042 981 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 ZSCAN30Q86W11 494 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 GAS2L3Q86XJ1 694 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 MAP4K1Q92918 833 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 SNRKQ9NRH2 765 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 CIZ1Q9ULV3 898 aaPredicted RBP19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 MED23Q9ULK4 1368 aa19.21■□□□□ 0.67
PCDHB6-202ENST00000622991 SSFA2P28290 1259 aa19.21■□□□□ 0.66
PCDHB6-202ENST00000622991 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.66
PCDHB6-202ENST00000622991 UTP14AQ9BVJ6 771 aaKnown RBP19.21■□□□□ 0.66
PCDHB6-202ENST00000622991 PAG1Q9NWQ8 432 aa19.21■□□□□ 0.66
PCDHB6-202ENST00000622991 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 RIC1Q4ADV7 1423 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 ANKRD36CQ5JPF3 1778 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 SCARF1Q14162 830 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 METTL24Q5JXM2 366 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 IFIT1P09914 478 aaKnown RBP19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 AMIGO3Q86WK7 504 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 KBTBD3Q8NAB2 608 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 CNNM1Q9NRU3 951 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
PCDHB6-202ENST00000622991 PI16Q6UXB8 463 aa19.19■□□□□ 0.66
PCDHB6-202ENST00000622991 HELBQ8NG08 1087 aaPredicted RBP19.19■□□□□ 0.66
PCDHB6-202ENST00000622991 TAF5LO75529 589 aa19.19■□□□□ 0.66
PCDHB6-202ENST00000622991 NTSR2O95665 410 aa19.19■□□□□ 0.66
PCDHB6-202ENST00000622991 CCDC173Q0VFZ6 552 aa19.19■□□□□ 0.66
PCDHB6-202ENST00000622991 SNAP23O00161 211 aa19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 CASTP20810 708 aaKnown RBP19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 KCNJ4P48050 445 aa19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 FKBP4Q02790 459 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 CREB3L3Q68CJ9 461 aa19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 MSNP26038 577 aaKnown RBP19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 GORABQ5T7V8 394 aa19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 VGLL2Q8N8G2 317 aa19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 TTC14Q96N46 770 aa19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 ZHX1Q9UKY1 873 aaPredicted RBP19.18■□□□□ 0.66
PCDHB6-202ENST00000622991 JAKMIP1Q96N16 626 aaKnown RBP19.17■□□□□ 0.66
PCDHB6-202ENST00000622991 AKAP2Q9Y2D5 859 aa19.17■□□□□ 0.66
PCDHB6-202ENST00000622991 RREB1Q92766 1687 aa19.17■□□□□ 0.66
PCDHB6-202ENST00000622991 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
PCDHB6-202ENST00000622991 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
PCDHB6-202ENST00000622991 KCNB2Q92953 911 aa19.17■□□□□ 0.66
PCDHB6-202ENST00000622991 SLC27A2O14975 620 aa19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 R3HCC1Q9Y3T6 440 aaKnown RBP19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 THSD7AQ9UPZ6 1657 aa19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 AK2P54819 239 aa19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 PARP10Q53GL7 1025 aa19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 SEPT12Q8IYM1 358 aa19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 PPP1R9BQ96SB3 815 aa19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 SRP68Q9UHB9 627 aaKnown RBP19.16■□□□□ 0.66
PCDHB6-202ENST00000622991 MCM2P49736 904 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 BCL2L12Q9HB09 334 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 DTNBO60941 627 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 CUL4AQ13619 759 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 C3orf67Q6ZVT6 689 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 RUFY3Q7L099 469 aa19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 COL5A3P25940 1745 aaPredicted RBP19.15■□□□□ 0.66
PCDHB6-202ENST00000622991 PDE8BO95263 885 aa19.14■□□□□ 0.65
PCDHB6-202ENST00000622991 MCMDC2Q4G0Z9 681 aa19.14■□□□□ 0.65
PCDHB6-202ENST00000622991 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.65
PCDHB6-202ENST00000622991 ZAP70P43403 619 aa19.14■□□□□ 0.65
PCDHB6-202ENST00000622991 VPS53Q5VIR6 699 aa19.14■□□□□ 0.65
PCDHB6-202ENST00000622991 MTERF4Q7Z6M4 381 aaKnown RBP19.14■□□□□ 0.65
PCDHB6-202ENST00000622991 CNTNAP4Q9C0A0 1308 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 GNPATO15228 680 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 USPL1Q5W0Q7 1092 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 ZDHHC9Q9Y397 364 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 ONECUT3O60422 494 aaPredicted RBP19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 TBC1D9BQ66K14 1250 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 TCEANC2Q96MN5 208 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 ARID3AQ99856 593 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 ZSWIM6Q9HCJ5 1215 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 PRDM10Q9NQV6 1147 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 MYH3P11055 1940 aa19.13■□□□□ 0.65
PCDHB6-202ENST00000622991 ZKSCAN1P17029 563 aaPredicted RBP19.12■□□□□ 0.65
PCDHB6-202ENST00000622991 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
PCDHB6-202ENST00000622991 ZNF652Q9Y2D9 606 aa19.12■□□□□ 0.65
PCDHB6-202ENST00000622991 LARGE1O95461 756 aa19.12■□□□□ 0.65
PCDHB6-202ENST00000622991 CYP2E1P05181 493 aaPredicted RBP19.12■□□□□ 0.65
PCDHB6-202ENST00000622991 MCAMP43121 646 aa19.12■□□□□ 0.65
PCDHB6-202ENST00000622991 CHAMP1Q96JM3 812 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms