RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 GMPSP49915 693 aaPredicted RBP22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 TNIP1Q15025 636 aa22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 MAP1SQ66K74 1059 aaPredicted RBP22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 CDCA7LQ96GN5 454 aa22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 CDC5LQ99459 802 aaKnown RBP22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 EYA3Q99504 573 aa22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 SPEF2Q9C093 1822 aa22.85■■□□□ 1.25
SCAMP4-213ENST00000621748 UFL1O94874 794 aa22.84■■□□□ 1.25
SCAMP4-213ENST00000621748 CSF1RP07333 972 aa22.84■■□□□ 1.25
SCAMP4-213ENST00000621748 DOK7Q18PE1 504 aa22.84■■□□□ 1.25
SCAMP4-213ENST00000621748 ZC3H12CQ9C0D7 883 aaKnown RBP22.84■■□□□ 1.25
SCAMP4-213ENST00000621748 KCNQ5Q9NR82 932 aa22.84■■□□□ 1.25
SCAMP4-213ENST00000621748 GGA1Q9UJY5 639 aa22.84■■□□□ 1.25
SCAMP4-213ENST00000621748 ECE2O60344 883 aa22.83■■□□□ 1.25
SCAMP4-213ENST00000621748 USP50Q70EL3 339 aaPredicted RBP22.83■■□□□ 1.25
SCAMP4-213ENST00000621748 CNTROBQ8N137 903 aa22.83■■□□□ 1.25
SCAMP4-213ENST00000621748 BSDC1Q9NW68 430 aaPredicted RBP22.83■■□□□ 1.25
SCAMP4-213ENST00000621748 PCNTO95613 3336 aa22.83■■□□□ 1.24
SCAMP4-213ENST00000621748 XDHP47989 1333 aa22.82■■□□□ 1.24
SCAMP4-213ENST00000621748 WTIPA6NIX2 430 aaPredicted RBP22.82■■□□□ 1.24
SCAMP4-213ENST00000621748 MRPL50Q8N5N7 158 aaKnown RBP22.82■■□□□ 1.24
SCAMP4-213ENST00000621748 BCL2L13Q9BXK5 485 aa22.82■■□□□ 1.24
SCAMP4-213ENST00000621748 ADARB2Q9NS39 739 aaKnown RBP22.82■■□□□ 1.24
SCAMP4-213ENST00000621748 MINPP1Q9UNW1 487 aa22.82■■□□□ 1.24
SCAMP4-213ENST00000621748 PSMD14O00487 310 aa22.81■■□□□ 1.24
SCAMP4-213ENST00000621748 ITGA6P23229 1130 aa22.81■■□□□ 1.24
SCAMP4-213ENST00000621748 FAM161AQ3B820 660 aa22.81■■□□□ 1.24
SCAMP4-213ENST00000621748 CREBZFQ9NS37 354 aa22.81■■□□□ 1.24
SCAMP4-213ENST00000621748 ZBTB12Q9Y330 459 aaPredicted RBP22.81■■□□□ 1.24
SCAMP4-213ENST00000621748 SCN9AQ15858 1988 aa22.81■■□□□ 1.24
SCAMP4-213ENST00000621748 SHTN1A0MZ66 631 aa22.8■■□□□ 1.24
SCAMP4-213ENST00000621748 FOXO4P98177 505 aa22.8■■□□□ 1.24
SCAMP4-213ENST00000621748 SLC4A10Q6U841 1118 aa22.8■■□□□ 1.24
SCAMP4-213ENST00000621748 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
SCAMP4-213ENST00000621748 ATP2B4P23634 1241 aa22.79■■□□□ 1.24
SCAMP4-213ENST00000621748 JMYQ8N9B5 988 aa22.79■■□□□ 1.24
SCAMP4-213ENST00000621748 SSH1Q8WYL5 1049 aa22.79■■□□□ 1.24
SCAMP4-213ENST00000621748 CNOT7Q9UIV1 285 aaKnown RBP22.79■■□□□ 1.24
SCAMP4-213ENST00000621748 GRM8O00222 908 aa22.78■■□□□ 1.24
SCAMP4-213ENST00000621748 IGHMBP2P38935 993 aaKnown RBP22.78■■□□□ 1.24
SCAMP4-213ENST00000621748 ALDH1L1O75891 902 aa22.77■■□□□ 1.24
SCAMP4-213ENST00000621748 HIRAP54198 1017 aaPredicted RBP22.77■■□□□ 1.24
SCAMP4-213ENST00000621748 EPHA10Q5JZY3 1008 aa22.77■■□□□ 1.24
SCAMP4-213ENST00000621748 SRCIN1Q9C0H9 1055 aa22.77■■□□□ 1.24
SCAMP4-213ENST00000621748 G3V3G9 751 aa22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 CCT4P50991 539 aaKnown RBP22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 FMR1Q06787 632 aaKnown RBP eCLIP22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 DCAF8Q5TAQ9 597 aa22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 MICALL2Q8IY33 904 aa22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 TRPM4Q8TD43 1214 aa22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 DPF2Q92785 391 aa22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 C9orf78Q9NZ63 289 aaPredicted RBP22.76■■□□□ 1.23
SCAMP4-213ENST00000621748 TMEM88BA6NKF7 163 aa22.75■■□□□ 1.23
SCAMP4-213ENST00000621748 VIL1P09327 827 aaKnown RBP22.75■■□□□ 1.23
SCAMP4-213ENST00000621748 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
SCAMP4-213ENST00000621748 ANKRD18BA2A2Z9 1011 aa22.74■■□□□ 1.23
SCAMP4-213ENST00000621748 H7C1D1 291 aa22.74■■□□□ 1.23
SCAMP4-213ENST00000621748 LMBR1LQ6UX01 489 aa22.74■■□□□ 1.23
SCAMP4-213ENST00000621748 MKRN1Q9UHC7 482 aaKnown RBP22.74■■□□□ 1.23
SCAMP4-213ENST00000621748 CHMP3Q9Y3E7 222 aa22.74■■□□□ 1.23
SCAMP4-213ENST00000621748 RPS12P25398 132 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-213ENST00000621748 IFIT5Q13325 482 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-213ENST00000621748 PGAP2Q9UHJ9 254 aa22.73■■□□□ 1.23
SCAMP4-213ENST00000621748 PTPRCP08575 1304 aa22.73■■□□□ 1.23
SCAMP4-213ENST00000621748 TRAF5O00463 557 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 ALDH1L2Q3SY69 923 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 SAMD7Q7Z3H4 446 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 TXNRD3Q86VQ6 643 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 ANKRD2Q9GZV1 360 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 LEMD3Q9Y2U8 911 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 PSME4Q14997 1843 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 MED23Q9ULK4 1368 aa22.72■■□□□ 1.23
SCAMP4-213ENST00000621748 EGFRP00533 1210 aa22.71■■□□□ 1.23
SCAMP4-213ENST00000621748 NBPF7P0C2Y1 421 aaPredicted RBP22.71■■□□□ 1.23
SCAMP4-213ENST00000621748 CHRNDQ07001 517 aa22.71■■□□□ 1.23
SCAMP4-213ENST00000621748 PODNQ7Z5L7 613 aa22.71■■□□□ 1.23
SCAMP4-213ENST00000621748 ZC3H15Q8WU90 426 aaKnown RBP22.71■■□□□ 1.23
SCAMP4-213ENST00000621748 KAZALD1Q96I82 304 aa22.71■■□□□ 1.23
SCAMP4-213ENST00000621748 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 SUCLG2Q96I99 432 aa22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 ZNF594Q96JF6 807 aaPredicted RBP22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 ZNF804BA4D1E1 1349 aa22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 UTYO14607 1347 aa22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 TRPM7Q96QT4 1865 aa22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 POLR2AP24928 1970 aaKnown RBP22.7■■□□□ 1.22
SCAMP4-213ENST00000621748 CNTNAP1P78357 1384 aa22.69■■□□□ 1.22
SCAMP4-213ENST00000621748 KLRK1P26718 216 aa22.69■■□□□ 1.22
SCAMP4-213ENST00000621748 RSBN1LQ6PCB5 846 aaPredicted RBP22.69■■□□□ 1.22
SCAMP4-213ENST00000621748 GLIS2Q9BZE0 524 aaPredicted RBP22.69■■□□□ 1.22
SCAMP4-213ENST00000621748 SMC4Q9NTJ3 1288 aa22.69■■□□□ 1.22
SCAMP4-213ENST00000621748 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 SNAP23O00161 211 aa22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 CCDC57Q2TAC2 916 aa22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 RBM26Q5T8P6 1007 aaKnown RBP22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 CST9Q5W186 159 aa22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
SCAMP4-213ENST00000621748 TAF5LO75529 589 aa22.67■■□□□ 1.22
SCAMP4-213ENST00000621748 AGBL3Q8NEM8 1001 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms