RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 CSF1RP07333 972 aa11.92□□□□□ -0.5
VTA1-205ENST00000620996 PLA2G12BQ9BX93 195 aa11.92□□□□□ -0.5
VTA1-205ENST00000620996 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
VTA1-205ENST00000620996 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.92□□□□□ -0.5
VTA1-205ENST00000620996 MCM4P33991 863 aa11.92□□□□□ -0.5
VTA1-205ENST00000620996 SEC31BQ9NQW1 1179 aa11.92□□□□□ -0.5
VTA1-205ENST00000620996 ZNF609O15014 1411 aa11.92□□□□□ -0.5
VTA1-205ENST00000620996 MCM2P49736 904 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 CREB3L3Q68CJ9 461 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
VTA1-205ENST00000620996 PDIA4P13667 645 aaKnown RBP11.91□□□□□ -0.5
VTA1-205ENST00000620996 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 PI16Q6UXB8 463 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 GPR108Q9NPR9 543 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 DTNBO60941 627 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 TAF5LO75529 589 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
VTA1-205ENST00000620996 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
VTA1-205ENST00000620996 ZPR1O75312 459 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 CYP46A1Q9Y6A2 500 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 SNAP23O00161 211 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 AK2P54819 239 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 PKP1Q13835 747 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 FOXD4L6Q3SYB3 417 aaPredicted RBP11.9□□□□□ -0.5
VTA1-205ENST00000620996 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 MCMDC2Q4G0Z9 681 aa11.9□□□□□ -0.5
VTA1-205ENST00000620996 FOXD4L3Q6VB84 417 aaPredicted RBP11.9□□□□□ -0.5
VTA1-205ENST00000620996 TRPC5Q9UL62 973 aaPredicted RBP11.9□□□□□ -0.5
VTA1-205ENST00000620996 IGHMBP2P38935 993 aaKnown RBP11.89□□□□□ -0.51
VTA1-205ENST00000620996 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
VTA1-205ENST00000620996 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
VTA1-205ENST00000620996 SLC27A2O14975 620 aa11.89□□□□□ -0.51
VTA1-205ENST00000620996 ZAP70P43403 619 aa11.89□□□□□ -0.51
VTA1-205ENST00000620996 SCARF1Q14162 830 aa11.89□□□□□ -0.51
VTA1-205ENST00000620996 RIPOR2Q9Y4F9 1068 aa11.89□□□□□ -0.51
VTA1-205ENST00000620996 ERFEQ4G0M1 354 aa11.89□□□□□ -0.51
VTA1-205ENST00000620996 EPB41L2O43491 1005 aaKnown RBP11.88□□□□□ -0.51
VTA1-205ENST00000620996 DDIT3P35638 169 aa11.88□□□□□ -0.51
VTA1-205ENST00000620996 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
VTA1-205ENST00000620996 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
VTA1-205ENST00000620996 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
VTA1-205ENST00000620996 NTSR2O95665 410 aa11.88□□□□□ -0.51
VTA1-205ENST00000620996 NUCB2P80303 420 aa11.88□□□□□ -0.51
VTA1-205ENST00000620996 NUP98P52948 1817 aa11.88□□□□□ -0.51
VTA1-205ENST00000620996 NECTIN1Q15223 517 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 AK7Q96M32 723 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
VTA1-205ENST00000620996 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 IDH1O75874 414 aaKnown RBP11.87□□□□□ -0.51
VTA1-205ENST00000620996 PDE8BO95263 885 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
VTA1-205ENST00000620996 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
VTA1-205ENST00000620996 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 RIC1Q4ADV7 1423 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 RNF113AO15541 343 aaKnown RBP11.87□□□□□ -0.51
VTA1-205ENST00000620996 PSMA5P28066 241 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 MED23Q9ULK4 1368 aa11.87□□□□□ -0.51
VTA1-205ENST00000620996 PHKA1P46020 1223 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 VPS53Q5VIR6 699 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 MCTP1Q6DN14 999 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
VTA1-205ENST00000620996 LIMCH1Q9UPQ0 1083 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 SLC5A1P13866 664 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 NCLP19338 710 aaKnown RBP11.86□□□□□ -0.51
VTA1-205ENST00000620996 RFC4P35249 363 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
VTA1-205ENST00000620996 CCDC83Q8IWF9 413 aa11.86□□□□□ -0.51
VTA1-205ENST00000620996 IQSEC3Q9UPP2 1182 aaPredicted RBP11.86□□□□□ -0.51
VTA1-205ENST00000620996 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
VTA1-205ENST00000620996 TRAK2O60296 914 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
VTA1-205ENST00000620996 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 MROH5Q6ZUA9 1318 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 MCAMP43121 646 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 STK3Q13188 491 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
VTA1-205ENST00000620996 M0R2C6 588 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 FAM196AQ6ZSG2 479 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 NECAB1Q8N987 351 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 MAST3O60307 1309 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
VTA1-205ENST00000620996 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
VTA1-205ENST00000620996 ANKRD18AQ8IVF6 992 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms