RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ZNF594Q96JF6 807 aaPredicted RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 BABAM1Q9NWV8 329 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 FPGT-TNNI3KV9GXZ4 949 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 ALKQ9UM73 1620 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 TPM1P09493 284 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 IFIT5Q13325 482 aaKnown RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 DHX32Q7L7V1 743 aaKnown RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 ZNF589Q86UQ0 364 aaPredicted RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 ARGLU1Q9NWB6 273 aaPredicted RBP8□□□□□ -1.13
SYNPO2-206ENST00000610556 SSH2Q76I76 1423 aa8□□□□□ -1.13
SYNPO2-206ENST00000610556 CCDC69A6NI79 296 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 URI1O94763 535 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 HOXB7P09629 217 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 GCKRQ14397 625 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 KLHL10Q6JEL2 608 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 AIDAQ96BJ3 306 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 TM6SF1Q9BZW5 370 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 NCOA3Q9Y6Q9 1424 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 TDO2P48775 406 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 SART3Q15020 963 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 DDX17Q92841 729 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 ZBTB9Q96C00 473 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 PDLIM2Q96JY6 352 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 NRBP1Q9UHY1 535 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 A2ML1A8K2U0 1454 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 LDHAL6AQ6ZMR3 332 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 MRPS27Q92552 414 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 LMTK2Q8IWU2 1503 aa7.99□□□□□ -1.13
SYNPO2-206ENST00000610556 U2AF2P26368 475 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 TRIM22Q8IYM9 498 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 UBXN4Q92575 508 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 PCMTD1Q96MG8 357 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 CCDC94Q9BW85 323 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 ABCF2Q9UG63 623 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 SMTNL1A8MU46 457 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 TERF1P54274 439 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 POLA2Q14181 598 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 TSR1Q2NL82 804 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 MAP4K1Q92918 833 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 MPHOSPH8Q99549 860 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 METTL22Q9BUU2 404 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 FTOQ9C0B1 505 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 CLSTN2Q9H4D0 955 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 NEURL4Q96JN8 1562 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 NEXMIFQ5QGS0 1516 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 NEURL1BA8MQ27 555 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 TNNT3P45378 269 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 ZNF75DP51815 510 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 SNW1Q13573 536 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 BCL2L12Q9HB09 334 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 MYOM1P52179 1685 aa7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 ZC3H13Q5T200 1668 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-206ENST00000610556 A0A0U1RQG5 324 aaPredicted RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 MINDY4BA8MYZ0 360 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 PRC1O43663 620 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 SASH1O94885 1247 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 CNNM3Q8NE01 707 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 CPLX3Q8WVH0 158 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 CPS1P31327 1500 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 CDKL5O76039 1030 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 A1BGP04217 495 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 TOP1P11387 765 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 SLFNL1Q499Z3 407 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 NAPBQ9H115 298 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 IFNKQ9P0W0 207 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 CAMSAP1Q5T5Y3 1602 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 MROH2AA6NES4 1674 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 IFIT3O14879 490 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 IL15P40933 162 aaPredicted RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 TEX35Q5T0J7 233 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 NCOA7Q8NI08 942 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 LRP2BPQ9P2M1 347 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 DBNLQ9UJU6 430 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 COL3A1P02461 1466 aaPredicted RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 A0A1B0GUL7 405 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 GOLGA8AA7E2F4 631 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 SPTLC2O15270 562 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 CAVIN2O95810 425 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 SYKP43405 635 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 METAP2P50579 478 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 ZSCAN25Q6NSZ9 544 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 ALG1Q9BT22 464 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 TRMT112Q9UI30 125 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 PAXBP1Q9Y5B6 917 aa7.97□□□□□ -1.13
SYNPO2-206ENST00000610556 KIAA1210Q9ULL0 1709 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 CRB1P82279 1406 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 CD163L1Q9NR16 1453 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 RNF113AO15541 343 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 TAF5LO75529 589 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 IARSP41252 1262 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 NECTIN1Q15223 517 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 KBTBD3Q8NAB2 608 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 ANKRD20A12PQ8NF67 263 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 GTF3C6Q969F1 213 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 TTC14Q96N46 770 aa7.96□□□□□ -1.13
SYNPO2-206ENST00000610556 USP28Q96RU2 1077 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms