RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TRIM28Q13263 835 aaKnown RBP8.45□□□□□ -1.06
HDDC2-207ENST00000608532 GLYCTKQ8IVS8 523 aa8.45□□□□□ -1.06
HDDC2-207ENST00000608532 DMRTC2Q8IXT2 367 aaPredicted RBP8.45□□□□□ -1.06
HDDC2-207ENST00000608532 OR13H1Q8NG92 308 aa8.45□□□□□ -1.06
HDDC2-207ENST00000608532 PLD4Q96BZ4 506 aa8.45□□□□□ -1.06
HDDC2-207ENST00000608532 RBSNQ9H1K0 784 aa8.45□□□□□ -1.06
HDDC2-207ENST00000608532 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
HDDC2-207ENST00000608532 ICMTO60725 284 aa8.44□□□□□ -1.06
HDDC2-207ENST00000608532 CYP2E1P05181 493 aaPredicted RBP8.44□□□□□ -1.06
HDDC2-207ENST00000608532 SOX18P35713 384 aa8.44□□□□□ -1.06
HDDC2-207ENST00000608532 HYAL2Q12891 473 aa8.44□□□□□ -1.06
HDDC2-207ENST00000608532 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
HDDC2-207ENST00000608532 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
HDDC2-207ENST00000608532 FRRS1LQ9P0K9 344 aa8.44□□□□□ -1.06
HDDC2-207ENST00000608532 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
HDDC2-207ENST00000608532 NPR3P17342 541 aa8.43□□□□□ -1.06
HDDC2-207ENST00000608532 COL13A1Q5TAT6 717 aaPredicted RBP8.43□□□□□ -1.06
HDDC2-207ENST00000608532 GDF6Q6KF10 455 aaPredicted RBP8.43□□□□□ -1.06
HDDC2-207ENST00000608532 SPACA7Q96KW9 195 aa8.43□□□□□ -1.06
HDDC2-207ENST00000608532 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
HDDC2-207ENST00000608532 KANSL3Q9P2N6 904 aa8.43□□□□□ -1.06
HDDC2-207ENST00000608532 EGFL7Q9UHF1 273 aa8.43□□□□□ -1.06
HDDC2-207ENST00000608532 FZD6O60353 706 aa8.42□□□□□ -1.06
HDDC2-207ENST00000608532 RAC1P63000 192 aa8.42□□□□□ -1.06
HDDC2-207ENST00000608532 NCAPG2Q86XI2 1143 aa8.42□□□□□ -1.06
HDDC2-207ENST00000608532 WFDC8Q8IUA0 241 aa8.42□□□□□ -1.06
HDDC2-207ENST00000608532 C1QTNF9BB2RNN3 333 aa8.41□□□□□ -1.06
HDDC2-207ENST00000608532 MSTNO14793 375 aa8.41□□□□□ -1.06
HDDC2-207ENST00000608532 APBA3O96018 575 aa8.41□□□□□ -1.06
HDDC2-207ENST00000608532 ITGB2P05107 769 aa8.41□□□□□ -1.06
HDDC2-207ENST00000608532 HOXD8P13378 290 aaPredicted RBP8.41□□□□□ -1.06
HDDC2-207ENST00000608532 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
HDDC2-207ENST00000608532 TXNDC2Q86VQ3 553 aa8.41□□□□□ -1.06
HDDC2-207ENST00000608532 CCER1Q8TC90 406 aaPredicted RBP8.41□□□□□ -1.06
HDDC2-207ENST00000608532 A0A0A0MRY4 1105 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 CES1P23141 567 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 CHRNA4P43681 627 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 USP5P45974 858 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 ATP11AP98196 1134 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 GRIK4Q16099 956 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 GRIK5Q16478 980 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 C1orf127Q8N9H9 656 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
HDDC2-207ENST00000608532 IGHA1P01876 353 aa8.39□□□□□ -1.07
HDDC2-207ENST00000608532 CEP135Q66GS9 1140 aa8.39□□□□□ -1.07
HDDC2-207ENST00000608532 IL22RA1Q8N6P7 574 aa8.39□□□□□ -1.07
HDDC2-207ENST00000608532 TTC9Q92623 222 aa8.39□□□□□ -1.07
HDDC2-207ENST00000608532 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
HDDC2-207ENST00000608532 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
HDDC2-207ENST00000608532 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.39□□□□□ -1.07
HDDC2-207ENST00000608532 PHACTR2O75167 634 aa8.38□□□□□ -1.07
HDDC2-207ENST00000608532 XKR5Q6UX68 686 aa8.38□□□□□ -1.07
HDDC2-207ENST00000608532 LACRTQ9GZZ8 138 aa8.38□□□□□ -1.07
HDDC2-207ENST00000608532 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
HDDC2-207ENST00000608532 SMNDC1O75940 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDDC2-207ENST00000608532 BRD1O95696 1058 aa8.37□□□□□ -1.07
HDDC2-207ENST00000608532 EHHADHQ08426 723 aa8.37□□□□□ -1.07
HDDC2-207ENST00000608532 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
HDDC2-207ENST00000608532 NDUFB5O43674 189 aa8.36□□□□□ -1.07
HDDC2-207ENST00000608532 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
HDDC2-207ENST00000608532 KIF4AO95239 1232 aa8.36□□□□□ -1.07
HDDC2-207ENST00000608532 CDC25BP30305 580 aa8.36□□□□□ -1.07
HDDC2-207ENST00000608532 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
HDDC2-207ENST00000608532 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
HDDC2-207ENST00000608532 BIN2Q9UBW5 565 aaPredicted RBP8.36□□□□□ -1.07
HDDC2-207ENST00000608532 ACPPP15309 386 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 ELNP15502 786 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 ARHGAP4P98171 946 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 ECM1Q16610 540 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 SHISA2Q6UWI4 295 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 GJD3Q8N144 294 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 CEP120Q8N960 986 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 SNX29Q8TEQ0 813 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 PBX4Q9BYU1 374 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 CHRDQ9H2X0 955 aa8.35□□□□□ -1.07
HDDC2-207ENST00000608532 EREGO14944 169 aa8.34□□□□□ -1.07
HDDC2-207ENST00000608532 TRPA1O75762 1119 aa8.34□□□□□ -1.07
HDDC2-207ENST00000608532 PROCP04070 461 aa8.34□□□□□ -1.07
HDDC2-207ENST00000608532 BAG6P46379 1132 aa8.34□□□□□ -1.07
HDDC2-207ENST00000608532 PMEPA1Q969W9 287 aa8.34□□□□□ -1.07
HDDC2-207ENST00000608532 SALL4Q9UJQ4 1053 aa8.34□□□□□ -1.07
HDDC2-207ENST00000608532 GATA4P43694 442 aa8.33□□□□□ -1.08
HDDC2-207ENST00000608532 DTWD1Q8N5C7 304 aa8.33□□□□□ -1.08
HDDC2-207ENST00000608532 USP21Q9UK80 565 aa8.33□□□□□ -1.08
HDDC2-207ENST00000608532 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 FAM177BA6PVY3 158 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
HDDC2-207ENST00000608532 SELPP16109 830 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 CDC27P30260 824 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 TXNDC11Q6PKC3 985 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 FBXO11Q86XK2 927 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 SH2B1Q9NRF2 756 aaPredicted RBP8.32□□□□□ -1.08
HDDC2-207ENST00000608532 PPME1Q9Y570 386 aa8.32□□□□□ -1.08
HDDC2-207ENST00000608532 C9orf172C9J069 976 aa8.31□□□□□ -1.08
HDDC2-207ENST00000608532 LINC01387J3KSC0 135 aa8.31□□□□□ -1.08
HDDC2-207ENST00000608532 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
HDDC2-207ENST00000608532 PTPRAP18433 802 aa8.31□□□□□ -1.08
HDDC2-207ENST00000608532 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms