RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 DPYDQ12882 1025 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 KANK4Q5T7N3 995 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 IGF2-ASQ6U949 168 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 HFE2Q6ZVN8 426 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 LPIN3Q9BQK8 851 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 NUDCQ9Y266 331 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 MAFBQ9Y5Q3 323 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 PRXQ9BXM0 1461 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 RAPGEF2Q9Y4G8 1499 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 PSAPP07602 524 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 TARSP26639 723 aaKnown RBP5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 NOS3P29474 1203 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 IRX6P78412 446 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 GPLD1P80108 840 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 NFKBIBQ15653 356 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 GDF6Q6KF10 455 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 TRPM4Q8TD43 1214 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 CALR3Q96L12 384 aaKnown RBP5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 RNF112Q9ULX5 631 aa5.32□□□□□ -1.56
HMGB1P50-201ENST00000605814 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L15C9J2P7 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L10C9JJH3 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L13C9JLJ4 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L12C9JPN9 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L11C9JVI0 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L21D6R901 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L18D6R9N7 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L22D6RA61 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L17D6RBQ6 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L19D6RCP7 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L20D6RJB6 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 MICAL2O94851 1124 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 INPP5BP32019 993 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP17L24Q0WX57 530 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 HSP90AA2PQ14568 343 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 L1TD1Q5T7N2 865 aaKnown RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 PROSER2Q86WR7 435 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 CMTR1Q8N1G2 835 aaKnown RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 FRAT1Q92837 279 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 SIN3AQ96ST3 1273 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 MRPL18Q9H0U6 180 aaKnown RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 PRKRIP1Q9H875 184 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 AKTIPQ9H8T0 292 aa5.31□□□□□ -1.56
HMGB1P50-201ENST00000605814 FAM177BA6PVY3 158 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 FOXO3O43524 673 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 GLB1P16278 677 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 NRLP54845 237 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 PLAURQ03405 335 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 C11orf91Q3C1V1 193 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 CRTC2Q53ET0 693 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 PRR23CQ6ZRP0 262 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 ANKMY2Q8IV38 441 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 RGL4Q8IZJ4 473 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 PLD4Q96BZ4 506 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 IFT43Q96FT9 208 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 MEGF10Q96KG7 1140 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 SSBP4Q9BWG4 385 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 VRTNQ9H8Y1 702 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 ZFATQ9P243 1243 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 BCS1LQ9Y276 419 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 POLR1AO95602 1720 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 CNTLNQ9NXG0 1405 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 ABCA5Q8WWZ7 1642 aa5.3□□□□□ -1.56
HMGB1P50-201ENST00000605814 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 XYLBO75191 536 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 DKK1O94907 266 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 HSP90AA1P07900 732 aaKnown RBP5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 SSTR4P31391 388 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 PTK7Q13308 1070 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 IL22RA1Q8N6P7 574 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 TTC9Q92623 222 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 NSUN5Q96P11 429 aaKnown RBP5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 PDCL3Q9H2J4 239 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 C11orf16Q9NQ32 467 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 DMGDHQ9UI17 866 aaKnown RBP5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 SMARCA4P51532 1647 aa5.29□□□□□ -1.56
HMGB1P50-201ENST00000605814 FAM196BA6NMK8 535 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 ZBTB42B2RXF5 422 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 PAX4O43316 350 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 FSTP19883 344 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 LMOD1P29536 600 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 TERF1P54274 439 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 CALD1Q05682 793 aaKnown RBP5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 GRIK5Q16478 980 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 MAP4K3Q8IVH8 894 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 PPP1R12CQ9BZL4 782 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 QTRT2Q9H974 415 aaKnown RBP5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 SRA1Q9HD15 236 aaKnown RBP5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 TLR7Q9NYK1 1049 aaKnown RBP5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 USP20Q9Y2K6 914 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 RTCBQ9Y3I0 505 aaKnown RBP5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 KDM5BQ9UGL1 1544 aa5.28□□□□□ -1.56
HMGB1P50-201ENST00000605814 LOC102724428A0A0B4J2F2 783 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 GSC2O15499 205 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 ALX3O95076 343 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 TPM2P07951 284 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 SIK1P57059 783 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 PDE3BQ13370 1112 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms