RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 XDHP47989 1333 aa13.33□□□□□ -0.28
SEH1L-208ENST00000590843 APOBEC3FQ8IUX4 373 aaKnown RBP13.33□□□□□ -0.28
SEH1L-208ENST00000590843 VPS37CA5D8V6 355 aaPredicted RBP13.32□□□□□ -0.28
SEH1L-208ENST00000590843 USP14P54578 494 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 CCDC148Q8NFR7 591 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 GLT8D2Q9H1C3 349 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 CRB1P82279 1406 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 FMNL1O95466 1100 aaPredicted RBP13.32□□□□□ -0.28
SEH1L-208ENST00000590843 COA7Q96BR5 231 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
SEH1L-208ENST00000590843 CLEC4GQ6UXB4 293 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 BCAR3O75815 825 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 HCLS1P14317 486 aaPredicted RBP13.32□□□□□ -0.28
SEH1L-208ENST00000590843 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
SEH1L-208ENST00000590843 FAM13BQ9NYF5 915 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
SEH1L-208ENST00000590843 KCNH4Q9UQ05 1017 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 SLC15A2Q16348 729 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 SPOUT1Q5T280 376 aaKnown RBP13.31□□□□□ -0.28
SEH1L-208ENST00000590843 USP37Q86T82 979 aa13.31□□□□□ -0.28
SEH1L-208ENST00000590843 NR1I2O75469 434 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
SEH1L-208ENST00000590843 NBPF11Q86T75 865 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 LBHD1Q9BQE6 289 aaPredicted RBP13.3□□□□□ -0.28
SEH1L-208ENST00000590843 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 PLXNC1O60486 1568 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 SMC2O95347 1197 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 CDC37L1Q7L3B6 337 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
SEH1L-208ENST00000590843 RIMS1Q86UR5 1692 aaKnown RBP13.3□□□□□ -0.28
SEH1L-208ENST00000590843 PLA2R1Q13018 1463 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 SPDYE3A6NKU9 549 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 METTL22Q9BUU2 404 aaPredicted RBP13.3□□□□□ -0.28
SEH1L-208ENST00000590843 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 ATP7BP35670 1465 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 NOP56O00567 594 aaKnown RBP13.3□□□□□ -0.28
SEH1L-208ENST00000590843 ITGA6P23229 1130 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 AP5M1Q9H0R1 490 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
SEH1L-208ENST00000590843 DIP2BQ9P265 1576 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 CALM1P0DP23 149 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 CALM2P0DP24 149 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 CALM3P0DP25 149 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 RAB3GAP1Q15042 981 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 TTLL5Q6EMB2 1281 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 RNF123Q5XPI4 1314 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
SEH1L-208ENST00000590843 EVI5LQ96CN4 794 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 ROBO2Q9HCK4 1378 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 ADGBQ8N7X0 1667 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 GTF2IP78347 998 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 ZSCAN31Q96LW9 406 aaPredicted RBP13.29□□□□□ -0.28
SEH1L-208ENST00000590843 ERBB3P21860 1342 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 DPP9Q86TI2 863 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 PANK1Q8TE04 598 aa13.29□□□□□ -0.28
SEH1L-208ENST00000590843 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 CHURC1Q8WUH1 139 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 SYNMO15061 1565 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 GOLIM4O00461 696 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 A1BGP04217 495 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 KCTD2Q14681 263 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 IQSEC3Q9UPP2 1182 aaPredicted RBP13.28□□□□□ -0.28
SEH1L-208ENST00000590843 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
SEH1L-208ENST00000590843 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.28
SEH1L-208ENST00000590843 STK38Q15208 465 aa13.27□□□□□ -0.28
SEH1L-208ENST00000590843 RSPH3Q86UC2 560 aa13.27□□□□□ -0.28
SEH1L-208ENST00000590843 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.28
SEH1L-208ENST00000590843 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.28
SEH1L-208ENST00000590843 DCCP43146 1447 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 PPP2R3CQ969Q6 453 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 NLRP5P59047 1200 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 MFSD14BQ5SR56 506 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 LPIN2Q92539 896 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 FAM89AQ96GI7 184 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.29
SEH1L-208ENST00000590843 LUC7LQ9NQ29 371 aaKnown RBP13.27□□□□□ -0.29
SEH1L-208ENST00000590843 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
SEH1L-208ENST00000590843 DACH1Q9UI36 760 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 TXLNBQ8N3L3 684 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 MX1P20591 662 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 C1orf167Q5SNV9 1468 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 CCDC173Q0VFZ6 552 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 AZI2Q9H6S1 392 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 C1orf115Q9H7X2 142 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms