RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 IFNL1Q8IU54 200 aa17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
SMARCA4-211ENST00000586921 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 SOX1O00570 391 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 ZNF280AP59817 542 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 SLC10A5Q5PT55 438 aa17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 SPRYD7Q5W111 196 aa17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
SMARCA4-211ENST00000586921 LAMB2P55268 1798 aa17■□□□□ 0.31
SMARCA4-211ENST00000586921 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
SMARCA4-211ENST00000586921 MANSC4A6NHS7 340 aaPredicted RBP17■□□□□ 0.31
SMARCA4-211ENST00000586921 C6orf229H3BNL8 230 aa17■□□□□ 0.31
SMARCA4-211ENST00000586921 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
SMARCA4-211ENST00000586921 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
SMARCA4-211ENST00000586921 UTP14AQ9BVJ6 771 aaKnown RBP17■□□□□ 0.31
SMARCA4-211ENST00000586921 A0A1W2PPC1 479 aa16.99■□□□□ 0.31
SMARCA4-211ENST00000586921 INHBEP58166 350 aa16.99■□□□□ 0.31
SMARCA4-211ENST00000586921 ARMC9Q7Z3E5 817 aa16.99■□□□□ 0.31
SMARCA4-211ENST00000586921 NSFL1CQ9UNZ2 370 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-211ENST00000586921 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
SMARCA4-211ENST00000586921 SCN9AQ15858 1988 aa16.98■□□□□ 0.31
SMARCA4-211ENST00000586921 GIGYF2Q6Y7W6 1299 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-211ENST00000586921 MYOZ2Q9NPC6 264 aa16.98■□□□□ 0.31
SMARCA4-211ENST00000586921 TAF1P21675 1872 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 IGF2BP3O00425 579 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 SP3Q02447 781 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 CRHR2Q13324 411 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 AGBL3Q8NEM8 1001 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 NECTIN2Q92692 538 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 EYA3Q99504 573 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 POLLQ9UGP5 575 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 PTCH2Q9Y6C5 1203 aa16.97■□□□□ 0.31
SMARCA4-211ENST00000586921 WTIPA6NIX2 430 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-211ENST00000586921 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-211ENST00000586921 MYL6BP14649 208 aa16.96■□□□□ 0.31
SMARCA4-211ENST00000586921 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
SMARCA4-211ENST00000586921 CAP1Q01518 475 aa16.95■□□□□ 0.3
SMARCA4-211ENST00000586921 PRKG1Q13976 671 aa16.95■□□□□ 0.3
SMARCA4-211ENST00000586921 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-211ENST00000586921 STXBP5LQ9Y2K9 1186 aa16.95■□□□□ 0.3
SMARCA4-211ENST00000586921 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
SMARCA4-211ENST00000586921 VCANP13611 3396 aa16.95■□□□□ 0.3
SMARCA4-211ENST00000586921 G3V3G9 751 aa16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 USP17L8P0C7I0 530 aa16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 MCM10Q7L590 875 aa16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 DEFB123Q8N688 67 aa16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 HTATIP2Q9BUP3 242 aa16.94■□□□□ 0.3
SMARCA4-211ENST00000586921 ZBTB48P10074 688 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-211ENST00000586921 GPSM2P81274 684 aa16.93■□□□□ 0.3
SMARCA4-211ENST00000586921 ARHGEF6Q15052 776 aa16.93■□□□□ 0.3
SMARCA4-211ENST00000586921 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
SMARCA4-211ENST00000586921 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
SMARCA4-211ENST00000586921 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-211ENST00000586921 SLC10A4Q96EP9 437 aa16.92■□□□□ 0.3
SMARCA4-211ENST00000586921 ZC3H12CQ9C0D7 883 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-211ENST00000586921 ANGEL1Q9UNK9 670 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-211ENST00000586921 NBPF9Q3BBW0 867 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 GPR153Q6NV75 609 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 TBC1D16Q8TBP0 767 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 SHISA4Q96DD7 197 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 PRDM6Q9NQX0 595 aa16.91■□□□□ 0.3
SMARCA4-211ENST00000586921 LAMB1P07942 1786 aa16.9■□□□□ 0.3
SMARCA4-211ENST00000586921 ZBTB7BO15156 539 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-211ENST00000586921 WNK4Q96J92 1243 aa16.9■□□□□ 0.3
SMARCA4-211ENST00000586921 GMLQ99445 158 aa16.89■□□□□ 0.29
SMARCA4-211ENST00000586921 COL3A1P02461 1466 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 Q7L0L9 218 aa16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 PSME4Q14997 1843 aa16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
SMARCA4-211ENST00000586921 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
SMARCA4-211ENST00000586921 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-211ENST00000586921 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
SMARCA4-211ENST00000586921 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-211ENST00000586921 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
SMARCA4-211ENST00000586921 SPTBN5Q9NRC6 3674 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-211ENST00000586921 WNT10BO00744 389 aa16.86■□□□□ 0.29
SMARCA4-211ENST00000586921 UFL1O94874 794 aa16.86■□□□□ 0.29
SMARCA4-211ENST00000586921 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
SMARCA4-211ENST00000586921 NKX2-3Q8TAU0 364 aa16.86■□□□□ 0.29
SMARCA4-211ENST00000586921 USP17L3A6NCW0 530 aa16.85■□□□□ 0.29
SMARCA4-211ENST00000586921 USP17L4A6NCW7 530 aa16.85■□□□□ 0.29
SMARCA4-211ENST00000586921 USP17L1Q7RTZ2 530 aa16.85■□□□□ 0.29
SMARCA4-211ENST00000586921 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
SMARCA4-211ENST00000586921 APOBEC3FQ8IUX4 373 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-211ENST00000586921 OGFOD1Q8N543 542 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms