RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SH3TC1Q8TE82 1336 aa18.65■□□□□ 0.58
CSNK1D-224ENST00000584672 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
CSNK1D-224ENST00000584672 PAPPA2Q9BXP8 1791 aa18.63■□□□□ 0.57
CSNK1D-224ENST00000584672 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
CSNK1D-224ENST00000584672 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
CSNK1D-224ENST00000584672 MKRN3Q13064 507 aaKnown RBP18.62■□□□□ 0.57
CSNK1D-224ENST00000584672 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
CSNK1D-224ENST00000584672 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-224ENST00000584672 UBE2Q2LH0YL09 131 aa18.61■□□□□ 0.57
CSNK1D-224ENST00000584672 TCIRG1Q13488 830 aa18.61■□□□□ 0.57
CSNK1D-224ENST00000584672 SCARF1Q14162 830 aa18.61■□□□□ 0.57
CSNK1D-224ENST00000584672 PKN2Q16513 984 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-224ENST00000584672 G3V3G9 751 aa18.6■□□□□ 0.57
CSNK1D-224ENST00000584672 DCAF8Q5TAQ9 597 aa18.6■□□□□ 0.57
CSNK1D-224ENST00000584672 PRAMEF18Q5VWM3 479 aa18.6■□□□□ 0.57
CSNK1D-224ENST00000584672 FAM89AQ96GI7 184 aa18.6■□□□□ 0.57
CSNK1D-224ENST00000584672 EYA3Q99504 573 aa18.6■□□□□ 0.57
CSNK1D-224ENST00000584672 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
CSNK1D-224ENST00000584672 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
CSNK1D-224ENST00000584672 TBC1D16Q8TBP0 767 aa18.59■□□□□ 0.57
CSNK1D-224ENST00000584672 GPR25O00155 361 aa18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 HABP4Q5JVS0 413 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 FBXO46Q6PJ61 603 aaPredicted RBP18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 GCC1Q96CN9 775 aa18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 PLEKHF1Q96S99 279 aa18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 ZC3H12CQ9C0D7 883 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-224ENST00000584672 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
CSNK1D-224ENST00000584672 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
CSNK1D-224ENST00000584672 UFL1O94874 794 aa18.56■□□□□ 0.56
CSNK1D-224ENST00000584672 FKBP1BP68106 108 aa18.56■□□□□ 0.56
CSNK1D-224ENST00000584672 R3HDMLQ9H3Y0 253 aa18.56■□□□□ 0.56
CSNK1D-224ENST00000584672 PSME4Q14997 1843 aa18.56■□□□□ 0.56
CSNK1D-224ENST00000584672 ZNF280AP59817 542 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-224ENST00000584672 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
CSNK1D-224ENST00000584672 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
CSNK1D-224ENST00000584672 RSBN1LQ6PCB5 846 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-224ENST00000584672 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-224ENST00000584672 MYOZ2Q9NPC6 264 aa18.54■□□□□ 0.56
CSNK1D-224ENST00000584672 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
CSNK1D-224ENST00000584672 FKTNO75072 461 aa18.53■□□□□ 0.56
CSNK1D-224ENST00000584672 RPS8P62241 208 aaKnown RBP18.53■□□□□ 0.56
CSNK1D-224ENST00000584672 PRKG1Q13976 671 aa18.53■□□□□ 0.56
CSNK1D-224ENST00000584672 SEC31BQ9NQW1 1179 aa18.53■□□□□ 0.56
CSNK1D-224ENST00000584672 CHPF2Q9P2E5 772 aa18.53■□□□□ 0.56
CSNK1D-224ENST00000584672 POTEFA5A3E0 1075 aa18.52■□□□□ 0.56
CSNK1D-224ENST00000584672 USP17L8P0C7I0 530 aa18.52■□□□□ 0.56
CSNK1D-224ENST00000584672 AGBL3Q8NEM8 1001 aa18.52■□□□□ 0.56
CSNK1D-224ENST00000584672 GGA1Q9UJY5 639 aa18.52■□□□□ 0.56
CSNK1D-224ENST00000584672 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
CSNK1D-224ENST00000584672 TM4SF4P48230 202 aa18.51■□□□□ 0.55
CSNK1D-224ENST00000584672 NBPF9Q3BBW0 867 aa18.51■□□□□ 0.55
CSNK1D-224ENST00000584672 ISCA1Q9BUE6 129 aa18.51■□□□□ 0.55
CSNK1D-224ENST00000584672 PITPNM2Q9BZ72 1349 aa18.5■□□□□ 0.55
CSNK1D-224ENST00000584672 RIPK4P57078 832 aa18.5■□□□□ 0.55
CSNK1D-224ENST00000584672 PLBD2Q8NHP8 589 aa18.5■□□□□ 0.55
CSNK1D-224ENST00000584672 CCDC85AQ96PX6 553 aaPredicted RBP18.5■□□□□ 0.55
CSNK1D-224ENST00000584672 GMLQ99445 158 aa18.5■□□□□ 0.55
CSNK1D-224ENST00000584672 MXD3Q9BW11 206 aa18.5■□□□□ 0.55
CSNK1D-224ENST00000584672 SREBF2Q12772 1141 aa18.49■□□□□ 0.55
CSNK1D-224ENST00000584672 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
CSNK1D-224ENST00000584672 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
CSNK1D-224ENST00000584672 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
CSNK1D-224ENST00000584672 ZNF609O15014 1411 aa18.49■□□□□ 0.55
CSNK1D-224ENST00000584672 PTPN12Q05209 780 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-224ENST00000584672 FBXW7Q969H0 707 aa18.48■□□□□ 0.55
CSNK1D-224ENST00000584672 FZD1Q9UP38 647 aa18.48■□□□□ 0.55
CSNK1D-224ENST00000584672 MKI67P46013 3256 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-224ENST00000584672 USP17L3A6NCW0 530 aa18.47■□□□□ 0.55
CSNK1D-224ENST00000584672 USP17L4A6NCW7 530 aa18.47■□□□□ 0.55
CSNK1D-224ENST00000584672 NF2P35240 595 aa18.47■□□□□ 0.55
CSNK1D-224ENST00000584672 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-224ENST00000584672 USP17L1Q7RTZ2 530 aa18.47■□□□□ 0.55
CSNK1D-224ENST00000584672 LAS1LQ9Y4W2 734 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-224ENST00000584672 HTTP42858 3142 aa18.46■□□□□ 0.55
CSNK1D-224ENST00000584672 WTIPA6NIX2 430 aaPredicted RBP18.46■□□□□ 0.55
CSNK1D-224ENST00000584672 SASH1O94885 1247 aa18.46■□□□□ 0.55
CSNK1D-224ENST00000584672 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
CSNK1D-224ENST00000584672 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
CSNK1D-224ENST00000584672 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
CSNK1D-224ENST00000584672 ZNF646O15015 1829 aaPredicted RBP18.45■□□□□ 0.54
CSNK1D-224ENST00000584672 FXR1P51114 621 aaKnown RBP eCLIP18.45■□□□□ 0.54
CSNK1D-224ENST00000584672 OTOP1Q7RTM1 612 aa18.45■□□□□ 0.54
CSNK1D-224ENST00000584672 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
CSNK1D-224ENST00000584672 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
CSNK1D-224ENST00000584672 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-224ENST00000584672 RBBP6Q7Z6E9 1792 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-224ENST00000584672 WNT10BO00744 389 aa18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 EN2P19622 333 aaPredicted RBP18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 SPRYD7Q5W111 196 aa18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 ARMC9Q7Z3E5 817 aa18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 CFHR5Q9BXR6 569 aa18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 ANGEL1Q9UNK9 670 aaKnown RBP18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 XDHP47989 1333 aa18.43■□□□□ 0.54
CSNK1D-224ENST00000584672 CD99L2Q8TCZ2 262 aa18.42■□□□□ 0.54
CSNK1D-224ENST00000584672 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-224ENST00000584672 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
CSNK1D-224ENST00000584672 DACT2Q5SW24 774 aa18.41■□□□□ 0.54
CSNK1D-224ENST00000584672 PODNQ7Z5L7 613 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms