RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 GRIK5Q16478 980 aa7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 ATCAYQ86WG3 371 aa7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 WFDC8Q8IUA0 241 aa7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 ABTB2Q8N961 1025 aa7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 PLD4Q96BZ4 506 aa7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 SELPP16109 830 aa7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 GDF6Q6KF10 455 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 FMR1NBQ8N0W7 255 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 HELQQ8TDG4 1101 aa7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 RBSNQ9H1K0 784 aa7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 USP21Q9UK80 565 aa7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 GNEQ9Y223 722 aaKnown RBP7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 FNDC3AQ9Y2H6 1198 aaKnown RBP7.28□□□□□ -1.24
PPP4R1-227ENST00000583988 C9orf172C9J069 976 aa7.27□□□□□ -1.25
PPP4R1-227ENST00000583988 SOX18P35713 384 aa7.27□□□□□ -1.25
PPP4R1-227ENST00000583988 TTC39BQ5VTQ0 682 aaPredicted RBP7.27□□□□□ -1.25
PPP4R1-227ENST00000583988 CCER1Q8TC90 406 aaPredicted RBP7.27□□□□□ -1.25
PPP4R1-227ENST00000583988 SEMA6BQ9H3T3 888 aa7.27□□□□□ -1.25
PPP4R1-227ENST00000583988 TPSG1Q9NRR2 321 aa7.27□□□□□ -1.25
PPP4R1-227ENST00000583988 NPR3P17342 541 aa7.26□□□□□ -1.25
PPP4R1-227ENST00000583988 FKBP4Q02790 459 aaKnown RBP eCLIP7.26□□□□□ -1.25
PPP4R1-227ENST00000583988 TTC9Q92623 222 aa7.26□□□□□ -1.25
PPP4R1-227ENST00000583988 NUDT16Q96DE0 195 aaKnown RBP7.26□□□□□ -1.25
PPP4R1-227ENST00000583988 EGFL7Q9UHF1 273 aa7.26□□□□□ -1.25
PPP4R1-227ENST00000583988 NRG1Q02297 640 aaPredicted RBP7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 DNM1Q05193 864 aaKnown RBP7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 MTMR3Q13615 1198 aa7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 MBTPS1Q14703 1052 aa7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 IL22RA1Q8N6P7 574 aa7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 OR13H1Q8NG92 308 aa7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 LENG1Q96BZ8 264 aaPredicted RBP7.25□□□□□ -1.25
PPP4R1-227ENST00000583988 HYAL2Q12891 473 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 ADGRE1Q14246 886 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 COL13A1Q5TAT6 717 aaPredicted RBP7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 ILDR2Q71H61 639 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 FBXO11Q86XK2 927 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 DTWD1Q8N5C7 304 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 EDEM1Q92611 657 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 SPACA7Q96KW9 195 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 ABI2Q9NYB9 513 aaPredicted RBP7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 TRIM33Q9UPN9 1127 aa7.24□□□□□ -1.25
PPP4R1-227ENST00000583988 ICMTO60725 284 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 ABL1P00519 1130 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 CYP2E1P05181 493 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 HOXD8P13378 290 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 MPSTP25325 297 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 SERPINB4P48594 390 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 ATP11AP98196 1134 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 NOM1Q5C9Z4 860 aaKnown RBP7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 ZNF438Q7Z4V0 828 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
PPP4R1-227ENST00000583988 ZBTB7CA1YPR0 619 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 DEAF1O75398 565 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 FAM13AO94988 1023 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 AAMPQ13685 434 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 ECM1Q16610 540 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 RSPO4Q2I0M5 234 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 C8orf34Q49A92 452 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 TXNRD3Q86VQ6 643 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 NCAPG2Q86XI2 1143 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 TTC16Q8NEE8 873 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 ELP3Q9H9T3 547 aa7.22□□□□□ -1.25
PPP4R1-227ENST00000583988 A6NHS1 94 aa7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 PCSK2P16519 638 aa7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 EIF1AXP47813 144 aaKnown RBP7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 CEP135Q66GS9 1140 aa7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 PDE12Q6L8Q7 609 aaKnown RBP7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 LACRTQ9GZZ8 138 aa7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 ANO2Q9NQ90 1003 aa7.21□□□□□ -1.26
PPP4R1-227ENST00000583988 PDGFAP04085 211 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 ITGB7P26010 798 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 CDC25BP30305 580 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 ZNF211Q13398 564 aaPredicted RBP7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 ALKBH2Q6NS38 261 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 IGF2-ASQ6U949 168 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 AEBP1Q8IUX7 1158 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 RASSF4Q9H2L5 321 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 GGNBP2Q9H3C7 697 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 KANSL3Q9P2N6 904 aa7.2□□□□□ -1.26
PPP4R1-227ENST00000583988 SOWAHDA6NJG2 315 aa7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 SMNDC1O75940 238 aaKnown RBP eCLIP7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 RPLP1P05386 114 aaKnown RBP7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 IREB2P48200 963 aaKnown RBP7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 TXNDC11Q6PKC3 985 aa7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 TP53INP1Q96A56 240 aa7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 CNTN3Q9P232 1028 aa7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 PPME1Q9Y570 386 aa7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 IVNS1ABPQ9Y6Y0 642 aa7.19□□□□□ -1.26
PPP4R1-227ENST00000583988 LINC01387J3KSC0 135 aa7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 DLL1O00548 723 aa7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 DYRK3O43781 588 aa7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 MZF1P28698 734 aaPredicted RBP7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 C1orf127Q8N9H9 656 aa7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 WFDC12Q8WWY7 111 aa7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 POLIQ9UNA4 740 aa7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.18□□□□□ -1.26
PPP4R1-227ENST00000583988 H3BRB1 525 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms