RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 CTAGE5O15320 804 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
RNF43-207ENST00000583753 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
RNF43-207ENST00000583753 COL3A1P02461 1466 aaPredicted RBP12.29□□□□□ -0.44
RNF43-207ENST00000583753 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 MAP4K1Q92918 833 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 CARD6Q9BX69 1037 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 SPTLC3Q9NUV7 552 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 SASH1O94885 1247 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 BMS1Q14692 1282 aaKnown RBP12.28□□□□□ -0.44
RNF43-207ENST00000583753 TMEM87AQ8NBN3 555 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 AOX1Q06278 1338 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 CAMSAP1Q5T5Y3 1602 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 LTKP29376 864 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 SCRN1Q12765 414 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 MCM6Q14566 821 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 EPC1Q9H2F5 836 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
RNF43-207ENST00000583753 TM6SF1Q9BZW5 370 aa12.27□□□□□ -0.44
RNF43-207ENST00000583753 NEMFO60524 1076 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 PHACTR2O75167 634 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 LMAN1P49257 510 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 GSDMDP57764 484 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 FAM193AP78312 1265 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 FBXO38Q6PIJ6 1188 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 AATKQ6ZMQ8 1374 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 SPTLC2O15270 562 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 CYP21A2P08686 494 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 DHX32Q7L7V1 743 aaKnown RBP12.27□□□□□ -0.45
RNF43-207ENST00000583753 CNNM3Q8NE01 707 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 TIGD1Q96MW7 591 aa12.27□□□□□ -0.45
RNF43-207ENST00000583753 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
RNF43-207ENST00000583753 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
RNF43-207ENST00000583753 DHX16O60231 1041 aaKnown RBP12.26□□□□□ -0.45
RNF43-207ENST00000583753 SYKP43405 635 aa12.26□□□□□ -0.45
RNF43-207ENST00000583753 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
RNF43-207ENST00000583753 IMMTQ16891 758 aaKnown RBP12.26□□□□□ -0.45
RNF43-207ENST00000583753 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
RNF43-207ENST00000583753 CCDC158Q5M9N0 1113 aa12.26□□□□□ -0.45
RNF43-207ENST00000583753 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
RNF43-207ENST00000583753 PUF60Q9UHX1 559 aaKnown RBP12.26□□□□□ -0.45
RNF43-207ENST00000583753 TAF5LO75529 589 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 ALDH1L1O75891 902 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 SEC31AO94979 1220 aaKnown RBP12.25□□□□□ -0.45
RNF43-207ENST00000583753 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
RNF43-207ENST00000583753 SAFBQ15424 915 aaKnown RBP eCLIP12.25□□□□□ -0.45
RNF43-207ENST00000583753 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 ERO1AQ96HE7 468 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 LZTFL1Q9NQ48 299 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
RNF43-207ENST00000583753 KCNA6P17658 529 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 CASQ1P31415 396 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 STX17P56962 302 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 CABP4P57796 275 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 POLA2Q14181 598 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 TDRD7Q8NHU6 1098 aaKnown RBP12.25□□□□□ -0.45
RNF43-207ENST00000583753 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
RNF43-207ENST00000583753 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
RNF43-207ENST00000583753 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 NDUFA8P51970 172 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 KMT5BQ4FZB7 885 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 TNNI3KQ59H18 835 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 FPGT-TNNI3KV9GXZ4 949 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 TCHHQ07283 1943 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 PTPRMP28827 1452 aa12.25□□□□□ -0.45
RNF43-207ENST00000583753 CCDC57Q2TAC2 916 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 DBNLQ9UJU6 430 aaKnown RBP12.24□□□□□ -0.45
RNF43-207ENST00000583753 CPSF1Q10570 1443 aaKnown RBP12.24□□□□□ -0.45
RNF43-207ENST00000583753 CPS1P31327 1500 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
RNF43-207ENST00000583753 GOLPH3LQ9H4A5 285 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 PCDHA7Q9UN72 937 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 CLIC4Q9Y696 253 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
RNF43-207ENST00000583753 ZNF213O14771 459 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 PRC1O43663 620 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
RNF43-207ENST00000583753 EVCP57679 992 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 KIF4BQ2VIQ3 1234 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 HSP90B2PQ58FF3 399 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.24□□□□□ -0.45
RNF43-207ENST00000583753 ADGRB2O60241 1585 aa12.24□□□□□ -0.45
RNF43-207ENST00000583753 KIF2AO00139 706 aaPredicted RBP12.23□□□□□ -0.45
RNF43-207ENST00000583753 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms