RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 ZBTB48P10074 688 aaPredicted RBP8.52□□□□□ -1.05
NUP85-221ENST00000583548 DCAF8Q5TAQ9 597 aa8.52□□□□□ -1.05
NUP85-221ENST00000583548 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
NUP85-221ENST00000583548 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
NUP85-221ENST00000583548 UTP14AQ9BVJ6 771 aaKnown RBP8.52□□□□□ -1.05
NUP85-221ENST00000583548 PRDM6Q9NQX0 595 aa8.52□□□□□ -1.05
NUP85-221ENST00000583548 DUOX1Q9NRD9 1551 aa8.52□□□□□ -1.05
NUP85-221ENST00000583548 ASTN2O75129 1339 aaPredicted RBP8.52□□□□□ -1.05
NUP85-221ENST00000583548 CUL9Q8IWT3 2517 aa8.51□□□□□ -1.05
NUP85-221ENST00000583548 RTL9Q8NET4 1388 aa8.51□□□□□ -1.05
NUP85-221ENST00000583548 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
NUP85-221ENST00000583548 PTPN12Q05209 780 aaKnown RBP8.51□□□□□ -1.05
NUP85-221ENST00000583548 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.51□□□□□ -1.05
NUP85-221ENST00000583548 POLR3GLQ9BT43 218 aa8.51□□□□□ -1.05
NUP85-221ENST00000583548 MYOZ2Q9NPC6 264 aa8.51□□□□□ -1.05
NUP85-221ENST00000583548 NSFL1CQ9UNZ2 370 aaKnown RBP8.51□□□□□ -1.05
NUP85-221ENST00000583548 KDM3BQ7LBC6 1761 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 NUP98P52948 1817 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 UNCXA6NJT0 531 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 LRRC37AA6NMS7 1700 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 RIMBP2O15034 1052 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 LDLRAD1Q5T700 205 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
NUP85-221ENST00000583548 NGEFQ8N5V2 710 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 DEFB123Q8N688 67 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 RTF1Q92541 710 aaKnown RBP8.5□□□□□ -1.05
NUP85-221ENST00000583548 SLC10A4Q96EP9 437 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
NUP85-221ENST00000583548 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 PANK3Q9H999 370 aa8.5□□□□□ -1.05
NUP85-221ENST00000583548 KIAA0100Q14667 2235 aaKnown RBP8.5□□□□□ -1.05
NUP85-221ENST00000583548 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
NUP85-221ENST00000583548 ZBTB7BO15156 539 aaPredicted RBP8.49□□□□□ -1.05
NUP85-221ENST00000583548 GNRH1P01148 92 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 MMP14P50281 582 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 PRMT2P55345 433 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 CRHR2Q13324 411 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 DOK7Q18PE1 504 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 LRCH3Q96II8 777 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 KNSTRNQ9Y448 316 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 PTCH2Q9Y6C5 1203 aa8.49□□□□□ -1.05
NUP85-221ENST00000583548 SZT2Q5T011 3432 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 ANKRD36CQ5JPF3 1778 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP85-221ENST00000583548 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
NUP85-221ENST00000583548 CAPN2P17655 700 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 KIF22Q14807 665 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 TTLL7Q6ZT98 887 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 APOBEC3FQ8IUX4 373 aaKnown RBP8.48□□□□□ -1.05
NUP85-221ENST00000583548 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 KCNQ5Q9NR82 932 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 ANGEL1Q9UNK9 670 aaKnown RBP8.48□□□□□ -1.05
NUP85-221ENST00000583548 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
NUP85-221ENST00000583548 HTTP42858 3142 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
NUP85-221ENST00000583548 WTIPA6NIX2 430 aaPredicted RBP8.47□□□□□ -1.05
NUP85-221ENST00000583548 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
NUP85-221ENST00000583548 MAP3K11Q16584 847 aa8.47□□□□□ -1.05
NUP85-221ENST00000583548 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
NUP85-221ENST00000583548 PRAMEF18Q5VWM3 479 aa8.47□□□□□ -1.05
NUP85-221ENST00000583548 WNK4Q96J92 1243 aa8.47□□□□□ -1.05
NUP85-221ENST00000583548 MTMR10Q9NXD2 777 aa8.47□□□□□ -1.05
NUP85-221ENST00000583548 POLLQ9UGP5 575 aa8.47□□□□□ -1.05
NUP85-221ENST00000583548 A0A0C4DFX4 3053 aa8.46□□□□□ -1.05
NUP85-221ENST00000583548 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.05
NUP85-221ENST00000583548 LAMB1P07942 1786 aa8.46□□□□□ -1.05
NUP85-221ENST00000583548 U2SURPO15042 1029 aaKnown RBP8.46□□□□□ -1.06
NUP85-221ENST00000583548 EVI5O60447 810 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 MYCP01106 439 aaPredicted RBP8.46□□□□□ -1.06
NUP85-221ENST00000583548 MYL6BP14649 208 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 BMP8BP34820 402 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 GJA8P48165 433 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 PNISRQ8TF01 805 aaKnown RBP8.46□□□□□ -1.06
NUP85-221ENST00000583548 GMLQ99445 158 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 SH3TC1Q8TE82 1336 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 MYO3BQ8WXR4 1341 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 COL6A3P12111 3177 aa8.46□□□□□ -1.06
NUP85-221ENST00000583548 TESPA1A2RU30 521 aaPredicted RBP8.45□□□□□ -1.06
NUP85-221ENST00000583548 USP17L3A6NCW0 530 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 USP17L4A6NCW7 530 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
NUP85-221ENST00000583548 GJB1P08034 283 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
NUP85-221ENST00000583548 COL9A1P20849 921 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 GPSM2P81274 684 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 PRKG1Q13976 671 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 TAF7Q15545 349 aaPredicted RBP8.45□□□□□ -1.06
NUP85-221ENST00000583548 NBPF9Q3BBW0 867 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 LRIT3Q3SXY7 679 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 USP17L1Q7RTZ2 530 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 PODNQ7Z5L7 613 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 UBE2Q1Q7Z7E8 422 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 SH3TC2Q8TF17 1288 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 SHISA4Q96DD7 197 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
NUP85-221ENST00000583548 TRMT112Q9UI30 125 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms