RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 MKRN1Q9UHC7 482 aaKnown RBP28.54■■■□□ 2.16
CASC3-207ENST00000581849 GGA1Q9UJY5 639 aa28.54■■■□□ 2.16
CASC3-207ENST00000581849 XDHP47989 1333 aa28.53■■■□□ 2.16
CASC3-207ENST00000581849 IFFO2Q5TF58 517 aa28.53■■■□□ 2.16
CASC3-207ENST00000581849 ZC3H15Q8WU90 426 aaKnown RBP28.53■■■□□ 2.16
CASC3-207ENST00000581849 DBNDD1Q9H9R9 158 aa28.53■■■□□ 2.16
CASC3-207ENST00000581849 PGAP2Q9UHJ9 254 aa28.53■■■□□ 2.16
CASC3-207ENST00000581849 RIMBP2O15034 1052 aa28.52■■■□□ 2.16
CASC3-207ENST00000581849 ECE2O60344 883 aa28.52■■■□□ 2.16
CASC3-207ENST00000581849 UFL1O94874 794 aa28.52■■■□□ 2.16
CASC3-207ENST00000581849 RPS12P25398 132 aaKnown RBP28.52■■■□□ 2.16
CASC3-207ENST00000581849 UBE3BQ7Z3V4 1068 aa28.52■■■□□ 2.16
CASC3-207ENST00000581849 CCDC85AQ96PX6 553 aaPredicted RBP28.52■■■□□ 2.16
CASC3-207ENST00000581849 ZNF521Q96K83 1311 aa28.51■■■□□ 2.15
CASC3-207ENST00000581849 PCNTO95613 3336 aa28.51■■■□□ 2.15
CASC3-207ENST00000581849 TRPM7Q96QT4 1865 aa28.51■■■□□ 2.15
CASC3-207ENST00000581849 RASSF10A6NK89 507 aa28.5■■■□□ 2.15
CASC3-207ENST00000581849 H7C1D1 291 aa28.5■■■□□ 2.15
CASC3-207ENST00000581849 PSMD14O00487 310 aa28.5■■■□□ 2.15
CASC3-207ENST00000581849 GREM2Q9H772 168 aa28.5■■■□□ 2.15
CASC3-207ENST00000581849 BSDC1Q9NW68 430 aaPredicted RBP28.5■■■□□ 2.15
CASC3-207ENST00000581849 CNOT7Q9UIV1 285 aaKnown RBP28.5■■■□□ 2.15
CASC3-207ENST00000581849 ATP2B4P23634 1241 aa28.49■■■□□ 2.15
CASC3-207ENST00000581849 CASP7P55210 303 aa28.49■■■□□ 2.15
CASC3-207ENST00000581849 ZNF609O15014 1411 aa28.49■■■□□ 2.15
CASC3-207ENST00000581849 HSPA1AP0DMV8 641 aaKnown RBP28.48■■■□□ 2.15
CASC3-207ENST00000581849 HSPA1BP0DMV9 641 aaKnown RBP28.48■■■□□ 2.15
CASC3-207ENST00000581849 DOK7Q18PE1 504 aa28.47■■■□□ 2.15
CASC3-207ENST00000581849 MICALL2Q8IY33 904 aa28.47■■■□□ 2.15
CASC3-207ENST00000581849 SCN9AQ15858 1988 aa28.46■■■□□ 2.15
CASC3-207ENST00000581849 PSME4Q14997 1843 aa28.46■■■□□ 2.15
CASC3-207ENST00000581849 GPR101Q96P66 508 aaPredicted RBP28.46■■■□□ 2.15
CASC3-207ENST00000581849 G3V3G9 751 aa28.45■■■□□ 2.14
CASC3-207ENST00000581849 CSF1RP07333 972 aa28.45■■■□□ 2.14
CASC3-207ENST00000581849 VIL1P09327 827 aaKnown RBP28.45■■■□□ 2.14
CASC3-207ENST00000581849 HIRAP54198 1017 aaPredicted RBP28.45■■■□□ 2.14
CASC3-207ENST00000581849 DCAF8Q5TAQ9 597 aa28.45■■■□□ 2.14
CASC3-207ENST00000581849 ZBTB12Q9Y330 459 aaPredicted RBP28.45■■■□□ 2.14
CASC3-207ENST00000581849 SPEF2Q9C093 1822 aa28.44■■■□□ 2.14
CASC3-207ENST00000581849 IGHMBP2P38935 993 aaKnown RBP28.44■■■□□ 2.14
CASC3-207ENST00000581849 VEGFBP49765 207 aa28.44■■■□□ 2.14
CASC3-207ENST00000581849 DEFB115Q30KQ5 88 aa28.44■■■□□ 2.14
CASC3-207ENST00000581849 TRPM4Q8TD43 1214 aa28.44■■■□□ 2.14
CASC3-207ENST00000581849 MINPP1Q9UNW1 487 aa28.44■■■□□ 2.14
CASC3-207ENST00000581849 MED23Q9ULK4 1368 aa28.44■■■□□ 2.14
CASC3-207ENST00000581849 BEND3Q5T5X7 828 aa28.43■■■□□ 2.14
CASC3-207ENST00000581849 CDC37L1Q7L3B6 337 aa28.42■■■□□ 2.14
CASC3-207ENST00000581849 PODNQ7Z5L7 613 aa28.42■■■□□ 2.14
CASC3-207ENST00000581849 ABT1Q9ULW3 272 aaKnown RBP28.42■■■□□ 2.14
CASC3-207ENST00000581849 TRAF5O00463 557 aa28.41■■■□□ 2.14
CASC3-207ENST00000581849 ITGA6P23229 1130 aa28.41■■■□□ 2.14
CASC3-207ENST00000581849 KCNQ5Q9NR82 932 aa28.41■■■□□ 2.14
CASC3-207ENST00000581849 SHTN1A0MZ66 631 aa28.4■■■□□ 2.14
CASC3-207ENST00000581849 F6X3S4 739 aa28.4■■■□□ 2.14
CASC3-207ENST00000581849 FAM161AQ3B820 660 aa28.4■■■□□ 2.14
CASC3-207ENST00000581849 CST9Q5W186 159 aa28.4■■■□□ 2.14
CASC3-207ENST00000581849 AGBL3Q8NEM8 1001 aa28.4■■■□□ 2.14
CASC3-207ENST00000581849 LEMD3Q9Y2U8 911 aa28.4■■■□□ 2.14
CASC3-207ENST00000581849 CCT4P50991 539 aaKnown RBP28.39■■■□□ 2.14
CASC3-207ENST00000581849 GLIS2Q9BZE0 524 aaPredicted RBP28.39■■■□□ 2.14
CASC3-207ENST00000581849 ANKRD2Q9GZV1 360 aa28.39■■■□□ 2.14
CASC3-207ENST00000581849 FMR1Q06787 632 aaKnown RBP eCLIP28.38■■■□□ 2.13
CASC3-207ENST00000581849 RSBN1LQ6PCB5 846 aaPredicted RBP28.38■■■□□ 2.13
CASC3-207ENST00000581849 SAMD7Q7Z3H4 446 aa28.38■■■□□ 2.13
CASC3-207ENST00000581849 MPHOSPH8Q99549 860 aa28.38■■■□□ 2.13
CASC3-207ENST00000581849 TLL2Q9Y6L7 1015 aa28.38■■■□□ 2.13
CASC3-207ENST00000581849 THSD7BQ9C0I4 1608 aa28.37■■■□□ 2.13
CASC3-207ENST00000581849 E9PSI1 815 aa28.37■■■□□ 2.13
CASC3-207ENST00000581849 ALDH1L1O75891 902 aa28.37■■■□□ 2.13
CASC3-207ENST00000581849 ECE1P42892 770 aa28.37■■■□□ 2.13
CASC3-207ENST00000581849 WDR33Q9C0J8 1336 aaKnown RBP28.37■■■□□ 2.13
CASC3-207ENST00000581849 ANKRD18BA2A2Z9 1011 aa28.36■■■□□ 2.13
CASC3-207ENST00000581849 GRM8O00222 908 aa28.36■■■□□ 2.13
CASC3-207ENST00000581849 CELF2O95319 508 aaKnown RBP28.35■■■□□ 2.13
CASC3-207ENST00000581849 ZNF280AP59817 542 aaPredicted RBP28.35■■■□□ 2.13
CASC3-207ENST00000581849 FOXO4P98177 505 aa28.35■■■□□ 2.13
CASC3-207ENST00000581849 TBC1D10BQ4KMP7 808 aaPredicted RBP28.35■■■□□ 2.13
CASC3-207ENST00000581849 COL13A1Q5TAT6 717 aaPredicted RBP28.35■■■□□ 2.13
CASC3-207ENST00000581849 HHIPL1Q96JK4 782 aa28.35■■■□□ 2.13
CASC3-207ENST00000581849 USP17L3A6NCW0 530 aa28.34■■■□□ 2.13
CASC3-207ENST00000581849 USP17L4A6NCW7 530 aa28.34■■■□□ 2.13
CASC3-207ENST00000581849 KIF4BQ2VIQ3 1234 aa28.34■■■□□ 2.13
CASC3-207ENST00000581849 USP17L1Q7RTZ2 530 aa28.34■■■□□ 2.13
CASC3-207ENST00000581849 GMLQ99445 158 aa28.34■■■□□ 2.13
CASC3-207ENST00000581849 COA1Q9GZY4 146 aa28.34■■■□□ 2.13
CASC3-207ENST00000581849 IFIT5Q13325 482 aaKnown RBP28.33■■■□□ 2.13
CASC3-207ENST00000581849 ZNF804BA4D1E1 1349 aa28.33■■■□□ 2.13
CASC3-207ENST00000581849 EGFRP00533 1210 aa28.32■■■□□ 2.12
CASC3-207ENST00000581849 SAPCD2Q86UD0 394 aa28.32■■■□□ 2.12
CASC3-207ENST00000581849 AIDAQ96BJ3 306 aa28.32■■■□□ 2.12
CASC3-207ENST00000581849 DCPSQ96C86 337 aaKnown RBP28.32■■■□□ 2.12
CASC3-207ENST00000581849 CAPNS2Q96L46 248 aa28.32■■■□□ 2.12
CASC3-207ENST00000581849 SRCIN1Q9C0H9 1055 aa28.32■■■□□ 2.12
CASC3-207ENST00000581849 WBP1LQ9NX94 342 aa28.32■■■□□ 2.12
CASC3-207ENST00000581849 CCER2I3L3R5 266 aa28.31■■■□□ 2.12
CASC3-207ENST00000581849 MAP2K1Q02750 393 aaPredicted RBP28.31■■■□□ 2.12
CASC3-207ENST00000581849 C9orf78Q9NZ63 289 aaPredicted RBP28.31■■■□□ 2.12
CASC3-207ENST00000581849 MYO3BQ8WXR4 1341 aa28.31■■■□□ 2.12
CASC3-207ENST00000581849 PTPRCP08575 1304 aa28.3■■■□□ 2.12
CASC3-207ENST00000581849 WTIPA6NIX2 430 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms