RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 SYT17Q9BSW7 474 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 GREM2Q9H772 168 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
MKS1-211ENST00000581761 HIP1O00291 1037 aa17.74■□□□□ 0.43
MKS1-211ENST00000581761 SGSM2O43147 1006 aa17.74■□□□□ 0.43
MKS1-211ENST00000581761 GYS1P13807 737 aa17.74■□□□□ 0.43
MKS1-211ENST00000581761 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
MKS1-211ENST00000581761 MYH3P11055 1940 aa17.74■□□□□ 0.43
MKS1-211ENST00000581761 GOLGB1Q14789 3259 aaKnown RBP17.74■□□□□ 0.43
MKS1-211ENST00000581761 HCLS1P14317 486 aaPredicted RBP17.73■□□□□ 0.43
MKS1-211ENST00000581761 RFC4P35249 363 aa17.73■□□□□ 0.43
MKS1-211ENST00000581761 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
MKS1-211ENST00000581761 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
MKS1-211ENST00000581761 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
MKS1-211ENST00000581761 RGL2O15211 777 aa17.72■□□□□ 0.43
MKS1-211ENST00000581761 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
MKS1-211ENST00000581761 NTSR2O95665 410 aa17.72■□□□□ 0.43
MKS1-211ENST00000581761 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
MKS1-211ENST00000581761 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
MKS1-211ENST00000581761 IL25Q9H293 177 aa17.72■□□□□ 0.43
MKS1-211ENST00000581761 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
MKS1-211ENST00000581761 AKAP2Q9Y2D5 859 aa17.72■□□□□ 0.43
MKS1-211ENST00000581761 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
MKS1-211ENST00000581761 SCN7AQ01118 1682 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 TIMM10P62072 90 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 KIAA1211Q6ZU35 1233 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 CNNM1Q9NRU3 951 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.43
MKS1-211ENST00000581761 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
MKS1-211ENST00000581761 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
MKS1-211ENST00000581761 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
MKS1-211ENST00000581761 DNAJC2Q99543 621 aaKnown RBP17.7■□□□□ 0.42
MKS1-211ENST00000581761 HAUS7Q99871 368 aa17.7■□□□□ 0.42
MKS1-211ENST00000581761 LAMB2P55268 1798 aa17.69■□□□□ 0.42
MKS1-211ENST00000581761 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
MKS1-211ENST00000581761 LSG1Q9H089 658 aaKnown RBP17.69■□□□□ 0.42
MKS1-211ENST00000581761 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
MKS1-211ENST00000581761 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
MKS1-211ENST00000581761 RAD50Q92878 1312 aa17.69■□□□□ 0.42
MKS1-211ENST00000581761 ZPR1O75312 459 aa17.68■□□□□ 0.42
MKS1-211ENST00000581761 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
MKS1-211ENST00000581761 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
MKS1-211ENST00000581761 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
MKS1-211ENST00000581761 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
MKS1-211ENST00000581761 SPRYD3Q8NCJ5 442 aa17.68■□□□□ 0.42
MKS1-211ENST00000581761 EDC3Q96F86 508 aaKnown RBP17.68■□□□□ 0.42
MKS1-211ENST00000581761 RFX7Q2KHR2 1363 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
MKS1-211ENST00000581761 MMP10P09238 476 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 ADORA1P30542 326 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 ANAPC15P60006 121 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 TTC39AQ5SRH9 613 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 TBC1D9BQ66K14 1250 aa17.67■□□□□ 0.42
MKS1-211ENST00000581761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.67■□□□□ 0.42
MKS1-211ENST00000581761 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
MKS1-211ENST00000581761 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
MKS1-211ENST00000581761 TM4SF1P30408 202 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 ERFEQ4G0M1 354 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 CCDC158Q5M9N0 1113 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 FAM227BQ96M60 508 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 PALD1Q9ULE6 856 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 NDUFB9Q9Y6M9 179 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
MKS1-211ENST00000581761 ST18O60284 1047 aa17.65■□□□□ 0.42
MKS1-211ENST00000581761 HSPA4P34932 840 aa17.65■□□□□ 0.42
MKS1-211ENST00000581761 DDR1Q08345 913 aa17.65■□□□□ 0.42
MKS1-211ENST00000581761 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 GTF2E1P29083 439 aaPredicted RBP17.64■□□□□ 0.41
MKS1-211ENST00000581761 IGHMBP2P38935 993 aaKnown RBP17.64■□□□□ 0.41
MKS1-211ENST00000581761 NBR1Q14596 966 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 NFIXQ14938 502 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 DDX46Q7L014 1031 aaKnown RBP17.64■□□□□ 0.41
MKS1-211ENST00000581761 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 MPHOSPH8Q99549 860 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 PAG1Q9NWQ8 432 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 MROH5Q6ZUA9 1318 aa17.64■□□□□ 0.41
MKS1-211ENST00000581761 GOLIM4O00461 696 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 YY1P25490 414 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 VGLL2Q8N8G2 317 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 ANTXR1Q9H6X2 564 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 CCDC171Q6TFL3 1326 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 ABCC12Q96J65 1359 aa17.63■□□□□ 0.41
MKS1-211ENST00000581761 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
MKS1-211ENST00000581761 PTH1RQ03431 593 aa17.62■□□□□ 0.41
MKS1-211ENST00000581761 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
MKS1-211ENST00000581761 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
MKS1-211ENST00000581761 MED23Q9ULK4 1368 aa17.62■□□□□ 0.41
MKS1-211ENST00000581761 PDE8BO95263 885 aa17.61■□□□□ 0.41
MKS1-211ENST00000581761 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
MKS1-211ENST00000581761 PUM3Q15397 648 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms