RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
CTC1-209ENST00000581729 FBXO46Q6PJ61 603 aaPredicted RBP5.66□□□□□ -1.5
CTC1-209ENST00000581729 CLEC4GQ6UXB4 293 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 TPTE2Q6XPS3 522 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 KRT26Q7Z3Y9 468 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 ZC3H15Q8WU90 426 aaKnown RBP5.66□□□□□ -1.5
CTC1-209ENST00000581729 POLR3GLQ9BT43 218 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 CNOT7Q9UIV1 285 aaKnown RBP5.66□□□□□ -1.5
CTC1-209ENST00000581729 ZNRF3Q9ULT6 936 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 LAMA2P24043 3122 aaKnown RBP5.66□□□□□ -1.5
CTC1-209ENST00000581729 ABCC4O15439 1325 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 RTL9Q8NET4 1388 aa5.66□□□□□ -1.5
CTC1-209ENST00000581729 GPR25O00155 361 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 GPTP24298 496 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 RBM26Q5T8P6 1007 aaKnown RBP5.65□□□□□ -1.5
CTC1-209ENST00000581729 SUSD4Q5VX71 490 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 SLC17A8Q8NDX2 589 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 CCDC102AQ96A19 550 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 CDCA5Q96FF9 252 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 FMNL2Q96PY5 1086 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 BCL2L13Q9BXK5 485 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 RTFDC1Q9BY42 306 aaPredicted RBP5.65□□□□□ -1.5
CTC1-209ENST00000581729 PANK3Q9H999 370 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 HDAC9Q9UKV0 1011 aa5.65□□□□□ -1.5
CTC1-209ENST00000581729 CEMIPQ8WUJ3 1361 aa5.65□□□□□ -1.51
CTC1-209ENST00000581729 PRUNE2Q8WUY3 3088 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 AKAP11Q9UKA4 1901 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 H0YGN5 161 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 PSMD14O00487 310 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 NTSR2O95665 410 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 KIAA2012Q0VF49 1180 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 PKN2Q16513 984 aaKnown RBP5.64□□□□□ -1.51
CTC1-209ENST00000581729 CDCA8Q53HL2 280 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 PRAMEF18Q5VWM3 479 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 CC2D2BQ6DHV5 1058 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 TTLL7Q6ZT98 887 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 NGEFQ8N5V2 710 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 C2orf69Q8N8R5 385 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 RPGRQ92834 1020 aaKnown RBP5.64□□□□□ -1.51
CTC1-209ENST00000581729 ZNF428Q96B54 188 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 TEX13AQ9BXU3 409 aaPredicted RBP5.64□□□□□ -1.51
CTC1-209ENST00000581729 GGA3Q9NZ52 723 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 ATP6V0A2Q9Y487 856 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 KIF7Q2M1P5 1343 aa5.64□□□□□ -1.51
CTC1-209ENST00000581729 COL3A1P02461 1466 aaPredicted RBP5.64□□□□□ -1.51
CTC1-209ENST00000581729 POLR2AP24928 1970 aaKnown RBP5.64□□□□□ -1.51
CTC1-209ENST00000581729 UBE2Q2LH0YL09 131 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 SOX1O00570 391 aaPredicted RBP5.63□□□□□ -1.51
CTC1-209ENST00000581729 SLC24A1O60721 1099 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 GTF2E1P29083 439 aaPredicted RBP5.63□□□□□ -1.51
CTC1-209ENST00000581729 TEFQ10587 303 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 OTOP1Q7RTM1 612 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 MORC1Q86VD1 984 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 FAM212AQ96EL1 285 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 CRAMP1Q96RY5 1269 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 DBNDD1Q9H9R9 158 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 ZSWIM6Q9HCJ5 1215 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 RBM27Q9P2N5 1060 aaKnown RBP5.63□□□□□ -1.51
CTC1-209ENST00000581729 FZD1Q9UP38 647 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 ZNF652Q9Y2D9 606 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 CDHR2Q9BYE9 1310 aa5.63□□□□□ -1.51
CTC1-209ENST00000581729 BTBD11A6QL63 1104 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 H7C1D1 291 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 ANGEL2Q5VTE6 544 aaKnown RBP5.62□□□□□ -1.51
CTC1-209ENST00000581729 DPP8Q6V1X1 898 aaPredicted RBP5.62□□□□□ -1.51
CTC1-209ENST00000581729 RBM17Q96I25 401 aaKnown RBP5.62□□□□□ -1.51
CTC1-209ENST00000581729 PHACTR3Q96KR7 559 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 ZBTB3Q9H5J0 574 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 TRIM17Q9Y577 477 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 KDM3BQ7LBC6 1761 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 RBBP6Q7Z6E9 1792 aaKnown RBP5.62□□□□□ -1.51
CTC1-209ENST00000581729 SCN9AQ15858 1988 aa5.62□□□□□ -1.51
CTC1-209ENST00000581729 GNAT3A8MTJ3 354 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 FKTNO75072 461 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 MYCP01106 439 aaPredicted RBP5.61□□□□□ -1.51
CTC1-209ENST00000581729 TAF1P21675 1872 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 TM4SF4P48230 202 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 DCTN1Q14203 1278 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 TNIP1Q15025 636 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 MAP3K15Q6ZN16 1313 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 MCM10Q7L590 875 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 NPM2Q86SE8 214 aaKnown RBP5.61□□□□□ -1.51
CTC1-209ENST00000581729 ZNF34Q8IZ26 560 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 MPNDQ8N594 471 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 DPF2Q92785 391 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 DCPSQ96C86 337 aaKnown RBP5.61□□□□□ -1.51
CTC1-209ENST00000581729 PRO3102Q9H379 93 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 MIS18AQ9NYP9 233 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 IBTKQ9P2D0 1353 aaPredicted RBP5.61□□□□□ -1.51
CTC1-209ENST00000581729 CDH23Q9H251 3354 aa5.61□□□□□ -1.51
CTC1-209ENST00000581729 NUP98P52948 1817 aa5.6□□□□□ -1.51
CTC1-209ENST00000581729 LAMB2P55268 1798 aa5.6□□□□□ -1.51
CTC1-209ENST00000581729 ZNF609O15014 1411 aa5.6□□□□□ -1.51
CTC1-209ENST00000581729 IGF2BP3O00425 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
CTC1-209ENST00000581729 RGL2O15211 777 aa5.6□□□□□ -1.51
CTC1-209ENST00000581729 SNRPA1P09661 255 aaKnown RBP5.6□□□□□ -1.51
CTC1-209ENST00000581729 HCLS1P14317 486 aaPredicted RBP5.6□□□□□ -1.51
CTC1-209ENST00000581729 SCARF1Q14162 830 aa5.6□□□□□ -1.51
CTC1-209ENST00000581729 AMER1Q5JTC6 1135 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms