RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 IL16Q14005 1332 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 ZC3H4Q9UPT8 1303 aaKnown RBP9□□□□□ -0.97
TVP23C-208ENST00000581273 ZNF771Q7L3S4 317 aaPredicted RBP8.99□□□□□ -0.97
TVP23C-208ENST00000581273 CHD1LQ86WJ1 897 aa8.99□□□□□ -0.97
TVP23C-208ENST00000581273 ARHGEF1Q92888 912 aaKnown RBP8.99□□□□□ -0.97
TVP23C-208ENST00000581273 SPTLC3Q9NUV7 552 aa8.99□□□□□ -0.97
TVP23C-208ENST00000581273 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
TVP23C-208ENST00000581273 CALCOCO1Q9P1Z2 691 aa8.99□□□□□ -0.97
TVP23C-208ENST00000581273 ABT1Q9ULW3 272 aaKnown RBP8.99□□□□□ -0.97
TVP23C-208ENST00000581273 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
TVP23C-208ENST00000581273 THSD7BQ9C0I4 1608 aa8.98□□□□□ -0.97
TVP23C-208ENST00000581273 KDM6AO15550 1401 aaPredicted RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 MKI67P46013 3256 aaKnown RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
TVP23C-208ENST00000581273 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 LMNB1P20700 586 aa8.98□□□□□ -0.97
TVP23C-208ENST00000581273 GTF2E1P29083 439 aaPredicted RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 NOLC1Q14978 699 aaKnown RBP eCLIP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 ASTLQ6HA08 431 aaPredicted RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
TVP23C-208ENST00000581273 CGNQ9P2M7 1197 aaKnown RBP8.98□□□□□ -0.97
TVP23C-208ENST00000581273 TRIM35Q9UPQ4 493 aa8.98□□□□□ -0.97
TVP23C-208ENST00000581273 ATMINO43313 823 aaPredicted RBP8.97□□□□□ -0.97
TVP23C-208ENST00000581273 AOC2O75106 756 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 PTCD1O75127 700 aaKnown RBP8.97□□□□□ -0.97
TVP23C-208ENST00000581273 GYS1P13807 737 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 CABP4P57796 275 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 ALDH1L2Q3SY69 923 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 CYP4F22Q6NT55 531 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 ATF7IPQ6VMQ6 1270 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 CAPNS2Q96L46 248 aa8.97□□□□□ -0.97
TVP23C-208ENST00000581273 GPR101Q96P66 508 aaPredicted RBP8.97□□□□□ -0.97
TVP23C-208ENST00000581273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.97□□□□□ -0.972e-14■■□□□ 13.7
TVP23C-208ENST00000581273 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
TVP23C-208ENST00000581273 GABBR2O75899 941 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 CHRNA5P30532 468 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 CBX1P83916 185 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 EIF4A2Q14240 407 aaKnown RBP8.96□□□□□ -0.98
TVP23C-208ENST00000581273 RNF20Q5VTR2 975 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
TVP23C-208ENST00000581273 ZNF530Q6P9A1 599 aaPredicted RBP8.96□□□□□ -0.98
TVP23C-208ENST00000581273 ITPRIPQ8IWB1 547 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 ANKRD7Q92527 254 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 TIGD1Q96MW7 591 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 POLKQ9UBT6 870 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 USP25Q9UHP3 1055 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 COL5A3P25940 1745 aaPredicted RBP8.96□□□□□ -0.98
TVP23C-208ENST00000581273 ANKRD26Q9UPS8 1709 aa8.96□□□□□ -0.98
TVP23C-208ENST00000581273 ERVV-2B6SEH9 535 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 RPS6KA4O75676 772 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 REC8O95072 547 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 RLBP1P12271 317 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 ATN1P54259 1190 aaPredicted RBP8.95□□□□□ -0.98
TVP23C-208ENST00000581273 PLEKHO1Q53GL0 409 aaPredicted RBP8.95□□□□□ -0.98
TVP23C-208ENST00000581273 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
TVP23C-208ENST00000581273 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 LDHDQ86WU2 507 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.95□□□□□ -0.98
TVP23C-208ENST00000581273 NCAPD2Q15021 1401 aa8.95□□□□□ -0.98
TVP23C-208ENST00000581273 PRPF40AO75400 957 aaKnown RBP8.94□□□□□ -0.98
TVP23C-208ENST00000581273 CRKLP46109 303 aaKnown RBP8.94□□□□□ -0.98
TVP23C-208ENST00000581273 MTHFSP49914 203 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
TVP23C-208ENST00000581273 DDR1Q08345 913 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 KIF2CQ99661 725 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 ZBTB40Q9NUA8 1239 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 PAXBP1Q9Y5B6 917 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 CNTNAP4Q9C0A0 1308 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 KDRP35968 1356 aa8.94□□□□□ -0.98
TVP23C-208ENST00000581273 TRIOBPQ9H2D6 2365 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 CTIFO43310 598 aaKnown RBP8.93□□□□□ -0.98
TVP23C-208ENST00000581273 DDNO94850 711 aaPredicted RBP8.93□□□□□ -0.98
TVP23C-208ENST00000581273 MCCP23508 829 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 EAPPQ56P03 285 aaPredicted RBP8.93□□□□□ -0.98
TVP23C-208ENST00000581273 C1orf141Q5JVX7 400 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 IER5LQ5T953 404 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 MORC1Q86VD1 984 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 NFATC2IPQ8NCF5 419 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 ARHGAP45Q92619 1136 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 INTS4Q96HW7 963 aaKnown RBP8.93□□□□□ -0.98
TVP23C-208ENST00000581273 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 TMEM51Q9NW97 253 aa8.93□□□□□ -0.98
TVP23C-208ENST00000581273 AFDNP55196 1824 aaKnown RBP8.92□□□□□ -0.98
TVP23C-208ENST00000581273 SYCE3A1L190 88 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 ZPR1O75312 459 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 ECE1P42892 770 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 CTR9Q6PD62 1173 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 TBC1D9Q6ZT07 1266 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 ATP6V1DQ9Y5K8 247 aa8.92□□□□□ -0.98
TVP23C-208ENST00000581273 ZNF831Q5JPB2 1677 aa8.91□□□□□ -0.98
TVP23C-208ENST00000581273 USP42Q9H9J4 1324 aaKnown RBP8.91□□□□□ -0.98
TVP23C-208ENST00000581273 SMTNL1A8MU46 457 aa8.91□□□□□ -0.98
TVP23C-208ENST00000581273 EPB41L2O43491 1005 aaKnown RBP8.91□□□□□ -0.98
TVP23C-208ENST00000581273 TRIM27P14373 513 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms