RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ATG9AQ7Z3C6 839 aa19.72■□□□□ 0.75
CSNK1D-212ENST00000580061 EXOC6BQ9Y2D4 811 aa19.72■□□□□ 0.75
CSNK1D-212ENST00000580061 IL15P40933 162 aaPredicted RBP19.71■□□□□ 0.75
CSNK1D-212ENST00000580061 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.75
CSNK1D-212ENST00000580061 ATP6V0A2Q9Y487 856 aa19.71■□□□□ 0.75
CSNK1D-212ENST00000580061 HSP90AB4PQ58FF6 505 aa19.7■□□□□ 0.74
CSNK1D-212ENST00000580061 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
CSNK1D-212ENST00000580061 SP8Q8IXZ3 490 aa19.7■□□□□ 0.74
CSNK1D-212ENST00000580061 CCDC136Q96JN2 1154 aa19.7■□□□□ 0.74
CSNK1D-212ENST00000580061 MINPP1Q9UNW1 487 aa19.7■□□□□ 0.74
CSNK1D-212ENST00000580061 GOLGB1Q14789 3259 aaKnown RBP19.7■□□□□ 0.74
CSNK1D-212ENST00000580061 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 RAB11FIP3O75154 756 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 SASH1O94885 1247 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 SLC51AQ86UW1 340 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 GCC1Q96CN9 775 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 MROH5Q6ZUA9 1318 aa19.69■□□□□ 0.74
CSNK1D-212ENST00000580061 CHRNDQ07001 517 aa19.68■□□□□ 0.74
CSNK1D-212ENST00000580061 OS9Q13438 667 aaPredicted RBP19.68■□□□□ 0.74
CSNK1D-212ENST00000580061 B4GALNT3Q6L9W6 998 aa19.68■□□□□ 0.74
CSNK1D-212ENST00000580061 WWC3Q9ULE0 1092 aa19.68■□□□□ 0.74
CSNK1D-212ENST00000580061 METTL24Q5JXM2 366 aa19.67■□□□□ 0.74
CSNK1D-212ENST00000580061 ERC1Q8IUD2 1116 aa19.67■□□□□ 0.74
CSNK1D-212ENST00000580061 VGLL2Q8N8G2 317 aa19.67■□□□□ 0.74
CSNK1D-212ENST00000580061 KDM2BQ8NHM5 1336 aa19.67■□□□□ 0.74
CSNK1D-212ENST00000580061 C21orf2O43822 256 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 CC2D2BQ6DHV5 1058 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 OLFM4Q6UX06 510 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 KIF1BPQ96EK5 621 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 ANKRD2Q9GZV1 360 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 TMX4Q9H1E5 349 aaPredicted RBP19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 ZNF219Q9P2Y4 722 aaPredicted RBP19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 BCS1LQ9Y276 419 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 FER1L6Q2WGJ9 1857 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 SNED1Q8TER0 1413 aa19.66■□□□□ 0.74
CSNK1D-212ENST00000580061 APBB1O00213 710 aa19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 PDE8BO95263 885 aa19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 TFCP2Q12800 502 aa19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 HELBQ8NG08 1087 aaPredicted RBP19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 RHPN1Q8TCX5 695 aa19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 CEP126Q9P2H0 1117 aa19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.65■□□□□ 0.74
CSNK1D-212ENST00000580061 TAF5LO75529 589 aa19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 GPSM2P81274 684 aa19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 LRRCC1Q9C099 1032 aa19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 PODXL2Q9NZ53 605 aa19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 XDHP47989 1333 aa19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 DUOX1Q9NRD9 1551 aa19.64■□□□□ 0.73
CSNK1D-212ENST00000580061 ARAP2Q8WZ64 1704 aa19.63■□□□□ 0.73
CSNK1D-212ENST00000580061 CCDC93Q567U6 631 aa19.63■□□□□ 0.73
CSNK1D-212ENST00000580061 SOGA3Q5TF21 947 aa19.63■□□□□ 0.73
CSNK1D-212ENST00000580061 ANKIB1Q9P2G1 1089 aa19.63■□□□□ 0.73
CSNK1D-212ENST00000580061 NSFL1CQ9UNZ2 370 aaKnown RBP19.63■□□□□ 0.73
CSNK1D-212ENST00000580061 GRIPAP1Q4V328 841 aa19.62■□□□□ 0.73
CSNK1D-212ENST00000580061 MPNDQ8N594 471 aa19.62■□□□□ 0.73
CSNK1D-212ENST00000580061 GPR108Q9NPR9 543 aa19.62■□□□□ 0.73
CSNK1D-212ENST00000580061 SMARCA5O60264 1052 aaPredicted RBP19.61■□□□□ 0.73
CSNK1D-212ENST00000580061 ATP2B4P23634 1241 aa19.61■□□□□ 0.73
CSNK1D-212ENST00000580061 ANKRD45Q5TZF3 282 aa19.61■□□□□ 0.73
CSNK1D-212ENST00000580061 IL1RAPL2Q9NP60 686 aa19.61■□□□□ 0.73
CSNK1D-212ENST00000580061 LEMD3Q9Y2U8 911 aa19.61■□□□□ 0.73
CSNK1D-212ENST00000580061 ZNF609O15014 1411 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 ZNF804BA4D1E1 1349 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 WTIPA6NIX2 430 aaPredicted RBP19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 SNAP23O00161 211 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 FGFR2P21802 821 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 PUM3Q15397 648 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 DPP8Q6V1X1 898 aaPredicted RBP19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 RTKN2Q8IZC4 609 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 TBC1D16Q8TBP0 767 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 GGA1Q9UJY5 639 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 AKAP2Q9Y2D5 859 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
CSNK1D-212ENST00000580061 A0A1B0GUL7 405 aa19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 NUCB1Q02818 461 aa19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 ATP2B3Q16720 1220 aa19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 CLASRPQ8N2M8 674 aaKnown RBP19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 LPIN2Q92539 896 aa19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 EAF2Q96CJ1 260 aaPredicted RBP19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 RTFDC1Q9BY42 306 aaPredicted RBP19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 POLLQ9UGP5 575 aa19.59■□□□□ 0.73
CSNK1D-212ENST00000580061 UFL1O94874 794 aa19.58■□□□□ 0.72
CSNK1D-212ENST00000580061 KCNJ4P48050 445 aa19.58■□□□□ 0.72
CSNK1D-212ENST00000580061 TIMM10P62072 90 aa19.58■□□□□ 0.72
CSNK1D-212ENST00000580061 CCDC88AQ3V6T2 1871 aa19.57■□□□□ 0.72
CSNK1D-212ENST00000580061 C6orf229H3BNL8 230 aa19.57■□□□□ 0.72
CSNK1D-212ENST00000580061 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.722e-6■■■□□ 17
CSNK1D-212ENST00000580061 CHD1LQ86WJ1 897 aa19.57■□□□□ 0.72
CSNK1D-212ENST00000580061 PSMD1Q99460 953 aa19.57■□□□□ 0.72
CSNK1D-212ENST00000580061 ZBTB47Q9UFB7 747 aaPredicted RBP19.57■□□□□ 0.72
CSNK1D-212ENST00000580061 IRS2Q9Y4H2 1338 aa19.56■□□□□ 0.72
CSNK1D-212ENST00000580061 SLC5A1P13866 664 aa19.56■□□□□ 0.72
CSNK1D-212ENST00000580061 FKBP4Q02790 459 aaKnown RBP eCLIP19.56■□□□□ 0.72
CSNK1D-212ENST00000580061 AACSQ86V21 672 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms