RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
SNRPD1-203ENST00000579618 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
SNRPD1-203ENST00000579618 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
SNRPD1-203ENST00000579618 PSMD14O00487 310 aa13.17□□□□□ -0.3
SNRPD1-203ENST00000579618 MYL6BP14649 208 aa13.17□□□□□ -0.3
SNRPD1-203ENST00000579618 MPNDQ8N594 471 aa13.17□□□□□ -0.3
SNRPD1-203ENST00000579618 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
SNRPD1-203ENST00000579618 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
SNRPD1-203ENST00000579618 COL4A1P02462 1669 aa13.16□□□□□ -0.3
SNRPD1-203ENST00000579618 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
SNRPD1-203ENST00000579618 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
SNRPD1-203ENST00000579618 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
SNRPD1-203ENST00000579618 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 HOXB7P09629 217 aa13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 DPF2Q92785 391 aa13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
SNRPD1-203ENST00000579618 MKI67P46013 3256 aaKnown RBP13.14□□□□□ -0.31
SNRPD1-203ENST00000579618 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
SNRPD1-203ENST00000579618 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
SNRPD1-203ENST00000579618 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
SNRPD1-203ENST00000579618 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
SNRPD1-203ENST00000579618 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
SNRPD1-203ENST00000579618 SCN9AQ15858 1988 aa13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 HTTP42858 3142 aa13.13□□□□□ -0.31
SNRPD1-203ENST00000579618 RBBP6Q7Z6E9 1792 aaKnown RBP13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 BBOX1O75936 387 aa13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 GRAPQ13588 217 aa13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
SNRPD1-203ENST00000579618 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
SNRPD1-203ENST00000579618 FXR1P51114 621 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNRPD1-203ENST00000579618 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
SNRPD1-203ENST00000579618 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
SNRPD1-203ENST00000579618 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
SNRPD1-203ENST00000579618 GPR25O00155 361 aa13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 ECE2O60344 883 aa13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
SNRPD1-203ENST00000579618 PSME4Q14997 1843 aa13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 VAMP4O75379 141 aa13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 ANGEL2Q5VTE6 544 aaKnown RBP13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
SNRPD1-203ENST00000579618 ANXA1P04083 346 aa13.08□□□□□ -0.32
SNRPD1-203ENST00000579618 CCDC30Q5VVM6 783 aa13.08□□□□□ -0.32
SNRPD1-203ENST00000579618 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
SNRPD1-203ENST00000579618 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
SNRPD1-203ENST00000579618 BRCA2P51587 3418 aa13.07□□□□□ -0.32
SNRPD1-203ENST00000579618 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
SNRPD1-203ENST00000579618 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
SNRPD1-203ENST00000579618 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
SNRPD1-203ENST00000579618 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
SNRPD1-203ENST00000579618 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
SNRPD1-203ENST00000579618 CENPFP49454 3210 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 UBE2Q2LH0YL09 131 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 GPSM2P81274 684 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 SCARF1Q14162 830 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 HDGFL1Q5TGJ6 251 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
SNRPD1-203ENST00000579618 FKTNO75072 461 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 TM4SF4P48230 202 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 FKBP1BP68106 108 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 PDIA6Q15084 440 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 ZNF609O15014 1411 aa13.05□□□□□ -0.32
SNRPD1-203ENST00000579618 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
SNRPD1-203ENST00000579618 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms