RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NRXN2Q9P2S2 1712 aa12.25□□□□□ -0.45
NPLOC4-219ENST00000576713 A0A087WZG4 1122 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 HRO43593 1189 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 C10orf71Q711Q0 1435 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 XAGE3Q8WTP9 111 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 KRTAP3-2Q9BYR7 98 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
NPLOC4-219ENST00000576713 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-219ENST00000576713 VAMP4O75379 141 aa12.23□□□□□ -0.45
NPLOC4-219ENST00000576713 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
NPLOC4-219ENST00000576713 COPS6Q7L5N1 327 aa12.23□□□□□ -0.45
NPLOC4-219ENST00000576713 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-219ENST00000576713 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
NPLOC4-219ENST00000576713 MAP3K15Q6ZN16 1313 aa12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 POTEMA6NI47 508 aa12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 G2E3Q7L622 706 aa12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
NPLOC4-219ENST00000576713 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.45
NPLOC4-219ENST00000576713 DDRGK1Q96HY6 314 aa12.21□□□□□ -0.45
NPLOC4-219ENST00000576713 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-219ENST00000576713 NUP98P52948 1817 aa12.21□□□□□ -0.46
NPLOC4-219ENST00000576713 SERPINB2P05120 415 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 WWC3Q9ULE0 1092 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 ANKRD31Q8N7Z5 1873 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
NPLOC4-219ENST00000576713 ERVV-1B6SEH8 477 aa12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 E9PSI1 815 aa12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 GPTP24298 496 aa12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 N4BP2Q86UW6 1770 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-219ENST00000576713 FAM177BA6PVY3 158 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 KCNA3P22001 575 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 ZNF34Q8IZ26 560 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 NIP7Q9Y221 180 aaKnown RBP eCLIP12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 CD2APQ9Y5K6 639 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 ADCY9O60503 1353 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
NPLOC4-219ENST00000576713 A0A0G2JLW4 131 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 CHRNA5P30532 468 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 SYNE4Q8N205 404 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 SETDB2Q96T68 719 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 HYPKQ9NX55 129 aa12.17□□□□□ -0.46
NPLOC4-219ENST00000576713 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 DPEP1P16444 411 aa12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 SULF1Q8IWU6 871 aa12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 PLBD2Q8NHP8 589 aa12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
NPLOC4-219ENST00000576713 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.46
NPLOC4-219ENST00000576713 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.46
NPLOC4-219ENST00000576713 NTSR2O95665 410 aa12.15□□□□□ -0.46
NPLOC4-219ENST00000576713 CD46P15529 392 aa12.15□□□□□ -0.46
NPLOC4-219ENST00000576713 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
NPLOC4-219ENST00000576713 CHD4Q14839 1912 aa12.15□□□□□ -0.46
NPLOC4-219ENST00000576713 BRCA1P38398 1863 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 NLRP10Q86W26 655 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 SSH1Q8WYL5 1049 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
NPLOC4-219ENST00000576713 COL4A1P02462 1669 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 YY1P25490 414 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 FLIIQ13045 1269 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms