RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 AKAP11Q9UKA4 1901 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 ADM5C9JUS6 153 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 G3V3G9 751 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 EGFRP00533 1210 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 ZNF157P51786 506 aaPredicted RBP15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 RPS8P62241 208 aaKnown RBP15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 KIF4BQ2VIQ3 1234 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
CTDNEP1-212ENST00000576613 COL4A1P02462 1669 aa15.13■□□□□ 0.01
CTDNEP1-212ENST00000576613 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
CTDNEP1-212ENST00000576613 RUNDC1Q96C34 613 aa15.13■□□□□ 0.01
CTDNEP1-212ENST00000576613 GGA3Q9NZ52 723 aa15.13■□□□□ 0.01
CTDNEP1-212ENST00000576613 TNRC18O15417 2968 aaPredicted RBP15.13■□□□□ 0.01
CTDNEP1-212ENST00000576613 VIL1P09327 827 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 KIF23Q02241 960 aaPredicted RBP15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 KCNQ5Q9NR82 932 aa15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 ANKIB1Q9P2G1 1089 aa15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 SCN9AQ15858 1988 aa15.12■□□□□ 0.01
CTDNEP1-212ENST00000576613 ZNF609O15014 1411 aa15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 UFL1O94874 794 aa15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 SLC10A3P09131 477 aa15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 GGA1Q9UJY5 639 aa15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
CTDNEP1-212ENST00000576613 PSME4Q14997 1843 aa15.1■□□□□ 0.01
CTDNEP1-212ENST00000576613 TRPA1O75762 1119 aa15.1■□□□□ 0.01
CTDNEP1-212ENST00000576613 CCDC152Q4G0S7 254 aa15.1■□□□□ 0.01
CTDNEP1-212ENST00000576613 DUSP27Q5VZP5 1158 aa15.1■□□□□ 0.01
CTDNEP1-212ENST00000576613 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
CTDNEP1-212ENST00000576613 RNF186Q9NXI6 227 aa15.1■□□□□ 0.01
CTDNEP1-212ENST00000576613 PAPPA2Q9BXP8 1791 aa15.09■□□□□ 0.01
CTDNEP1-212ENST00000576613 ZNF280AP59817 542 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-212ENST00000576613 RSBN1LQ6PCB5 846 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-212ENST00000576613 AGBL3Q8NEM8 1001 aa15.09■□□□□ 0.01
CTDNEP1-212ENST00000576613 FKBP1BP68106 108 aa15.08■□□□□ 0
CTDNEP1-212ENST00000576613 ANGEL2Q5VTE6 544 aaKnown RBP15.08■□□□□ 0
CTDNEP1-212ENST00000576613 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
CTDNEP1-212ENST00000576613 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
CTDNEP1-212ENST00000576613 PDE8AO60658 829 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 USP17L8P0C7I0 530 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 SCARF1Q14162 830 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 CSRNP1Q96S65 589 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 MYD88Q99836 296 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 MBIPQ9NS73 344 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 ASTN2O75129 1339 aaPredicted RBP15.07■□□□□ 0
CTDNEP1-212ENST00000576613 XDHP47989 1333 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 PITPNM2Q9BZ72 1349 aa15.07■□□□□ 0
CTDNEP1-212ENST00000576613 PCCAP05165 728 aaPredicted RBP15.06■□□□□ 0
CTDNEP1-212ENST00000576613 CTU1Q7Z7A3 348 aaKnown RBP15.06■□□□□ 0
CTDNEP1-212ENST00000576613 RASAL3Q86YV0 1011 aa15.06■□□□□ 0
CTDNEP1-212ENST00000576613 ANKRD18AQ8IVF6 992 aa15.06■□□□□ 0
CTDNEP1-212ENST00000576613 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
CTDNEP1-212ENST00000576613 CWC25Q9NXE8 425 aaPredicted RBP15.06■□□□□ 0
CTDNEP1-212ENST00000576613 USP17L3A6NCW0 530 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 USP17L4A6NCW7 530 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 DDX58O95786 925 aaKnown RBP15.05■□□□□ -0
CTDNEP1-212ENST00000576613 SOX10P56693 466 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 CALD1Q05682 793 aaKnown RBP15.05■□□□□ -0
CTDNEP1-212ENST00000576613 USP17L1Q7RTZ2 530 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 PODNQ7Z5L7 613 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 CHMP4AQ9BY43 222 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 PHAXQ9H814 394 aaKnown RBP15.05■□□□□ -0
CTDNEP1-212ENST00000576613 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 ADAMTS8Q9UP79 889 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 PDE4DIPQ5VU43 2346 aa15.05■□□□□ -0
CTDNEP1-212ENST00000576613 ATP2B4P23634 1241 aa15.04■□□□□ -0
CTDNEP1-212ENST00000576613 CCDC85AQ96PX6 553 aaPredicted RBP15.04■□□□□ -0
CTDNEP1-212ENST00000576613 GMLQ99445 158 aa15.04■□□□□ -0
CTDNEP1-212ENST00000576613 CDC5LQ99459 802 aaKnown RBP15.04■□□□□ -0
CTDNEP1-212ENST00000576613 IFT57Q9NWB7 429 aa15.04■□□□□ -0
CTDNEP1-212ENST00000576613 ZNF853P0CG23 659 aa15.03■□□□□ -0
CTDNEP1-212ENST00000576613 GNAI1P63096 354 aa15.03■□□□□ -0
CTDNEP1-212ENST00000576613 MYH3P11055 1940 aa15.02■□□□□ -0
CTDNEP1-212ENST00000576613 MED23Q9ULK4 1368 aa15.02■□□□□ -0
CTDNEP1-212ENST00000576613 SPEF2Q9C093 1822 aa15.02■□□□□ -0
CTDNEP1-212ENST00000576613 PKN2Q16513 984 aaKnown RBP15.02■□□□□ -0
CTDNEP1-212ENST00000576613 OGFOD1Q8N543 542 aa15.02■□□□□ -0
CTDNEP1-212ENST00000576613 METTL22Q9BUU2 404 aaPredicted RBP15.02■□□□□ -0
CTDNEP1-212ENST00000576613 HDAC9Q9UKV0 1011 aa15.02■□□□□ -0
CTDNEP1-212ENST00000576613 MYO3BQ8WXR4 1341 aa15.01□□□□□ -0.01
CTDNEP1-212ENST00000576613 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
CTDNEP1-212ENST00000576613 NF2P35240 595 aa15.01□□□□□ -0.01
CTDNEP1-212ENST00000576613 CTSWP56202 376 aa15.01□□□□□ -0.01
CTDNEP1-212ENST00000576613 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
CTDNEP1-212ENST00000576613 TTLL12Q14166 644 aaPredicted RBP15□□□□□ -0.01
CTDNEP1-212ENST00000576613 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
CTDNEP1-212ENST00000576613 JARID2Q92833 1246 aaPredicted RBP15□□□□□ -0.01
CTDNEP1-212ENST00000576613 HPS5Q9UPZ3 1129 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms