RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 TRPA1O75762 1119 aa13.05□□□□□ -0.32
CALCOCO2-227ENST00000575560 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
CALCOCO2-227ENST00000575560 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
CALCOCO2-227ENST00000575560 EYA3Q99504 573 aa13.05□□□□□ -0.32
CALCOCO2-227ENST00000575560 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
CALCOCO2-227ENST00000575560 POLR2AP24928 1970 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 SLC10A3P09131 477 aa13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 RPS8P62241 208 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 TRIM28Q13263 835 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
CALCOCO2-227ENST00000575560 COL4A1P02462 1669 aa13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 SULF1Q8IWU6 871 aa13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 DBF4Q9UBU7 674 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 PDE4DIPQ5VU43 2346 aa13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 ASTN2O75129 1339 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-227ENST00000575560 DDX60Q8IY21 1712 aaKnown RBP13.02□□□□□ -0.32
CALCOCO2-227ENST00000575560 IRS4O14654 1257 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO2-227ENST00000575560 HOXB7P09629 217 aa13.02□□□□□ -0.33
CALCOCO2-227ENST00000575560 SOX10P56693 466 aa13.02□□□□□ -0.33
CALCOCO2-227ENST00000575560 CDCA5Q96FF9 252 aa13.02□□□□□ -0.33
CALCOCO2-227ENST00000575560 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
CALCOCO2-227ENST00000575560 SCARF1Q14162 830 aa13.01□□□□□ -0.33
CALCOCO2-227ENST00000575560 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO2-227ENST00000575560 HDGFL1Q5TGJ6 251 aa13.01□□□□□ -0.33
CALCOCO2-227ENST00000575560 CTU1Q7Z7A3 348 aaKnown RBP13.01□□□□□ -0.33
CALCOCO2-227ENST00000575560 GMLQ99445 158 aa13.01□□□□□ -0.33
CALCOCO2-227ENST00000575560 HYPKQ9NX55 129 aa13.01□□□□□ -0.33
CALCOCO2-227ENST00000575560 ZNF609O15014 1411 aa13□□□□□ -0.33
CALCOCO2-227ENST00000575560 FKBP1BP68106 108 aa13□□□□□ -0.33
CALCOCO2-227ENST00000575560 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
CALCOCO2-227ENST00000575560 RSBN1LQ6PCB5 846 aaPredicted RBP13□□□□□ -0.33
CALCOCO2-227ENST00000575560 RASAL3Q86YV0 1011 aa13□□□□□ -0.33
CALCOCO2-227ENST00000575560 AGBL3Q8NEM8 1001 aa13□□□□□ -0.33
CALCOCO2-227ENST00000575560 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
CALCOCO2-227ENST00000575560 UFL1O94874 794 aa12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 ANKIB1Q9P2G1 1089 aa12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 GGA1Q9UJY5 639 aa12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 SCN9AQ15858 1988 aa12.99□□□□□ -0.33
CALCOCO2-227ENST00000575560 PITPNM2Q9BZ72 1349 aa12.98□□□□□ -0.33
CALCOCO2-227ENST00000575560 G3V3G9 751 aa12.98□□□□□ -0.33
CALCOCO2-227ENST00000575560 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
CALCOCO2-227ENST00000575560 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
CALCOCO2-227ENST00000575560 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
CALCOCO2-227ENST00000575560 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 RALBP1Q15311 655 aa12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 CCDC146Q8IYE0 955 aa12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
CALCOCO2-227ENST00000575560 TM4SF4P48230 202 aa12.96□□□□□ -0.33
CALCOCO2-227ENST00000575560 CCDC152Q4G0S7 254 aa12.96□□□□□ -0.33
CALCOCO2-227ENST00000575560 PRPF38BQ5VTL8 546 aaKnown RBP12.96□□□□□ -0.33
CALCOCO2-227ENST00000575560 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
CALCOCO2-227ENST00000575560 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
CALCOCO2-227ENST00000575560 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
CALCOCO2-227ENST00000575560 USP17L3A6NCW0 530 aa12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 USP17L4A6NCW7 530 aa12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 UBE2Q2LH0YL09 131 aa12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 PDE8AO60658 829 aa12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 CCDC191Q8NCU4 936 aa12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 ZNF296Q8WUU4 475 aaPredicted RBP12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 PHAXQ9H814 394 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 MKI67P46013 3256 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-227ENST00000575560 XDHP47989 1333 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 TBC1D8O95759 1140 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 ZNF853P0CG23 659 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 HTTP42858 3142 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
CALCOCO2-227ENST00000575560 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
CALCOCO2-227ENST00000575560 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO2-227ENST00000575560 MYD88Q99836 296 aa12.93□□□□□ -0.34
CALCOCO2-227ENST00000575560 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
CALCOCO2-227ENST00000575560 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms