RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 USP32Q8NFA0 1604 aa19.09■□□□□ 0.65
RAB40B-206ENST00000571995 NBPF26B4DH59 902 aa19.08■□□□□ 0.65
RAB40B-206ENST00000571995 NBPF14Q5TI25 921 aa19.08■□□□□ 0.65
RAB40B-206ENST00000571995 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.65
RAB40B-206ENST00000571995 NBPF15Q8N660 670 aa19.08■□□□□ 0.65
RAB40B-206ENST00000571995 INTS4Q96HW7 963 aaKnown RBP19.08■□□□□ 0.65
RAB40B-206ENST00000571995 CCDC39Q9UFE4 941 aa19.08■□□□□ 0.65
RAB40B-206ENST00000571995 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.65
RAB40B-206ENST00000571995 CCDC192P0DO97 292 aa19.08■□□□□ 0.64
RAB40B-206ENST00000571995 ZAP70P43403 619 aa19.08■□□□□ 0.64
RAB40B-206ENST00000571995 UBE2HP62256 183 aa19.08■□□□□ 0.64
RAB40B-206ENST00000571995 IMMTQ16891 758 aaKnown RBP19.08■□□□□ 0.64
RAB40B-206ENST00000571995 NRKQ7Z2Y5 1582 aa19.08■□□□□ 0.64
RAB40B-206ENST00000571995 TRIM29Q14134 588 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 LRRFIP1Q32MZ4 808 aaKnown RBP19.07■□□□□ 0.64
RAB40B-206ENST00000571995 LUZP1Q86V48 1076 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 ZNF213O14771 459 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 DDIT3P35638 169 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 ITGA6P23229 1130 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 PDIA6Q15084 440 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 MAP3K11Q16584 847 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 GJB4Q9NTQ9 266 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 WWC3Q9ULE0 1092 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 NIP7Q9Y221 180 aaKnown RBP eCLIP19.07■□□□□ 0.64
RAB40B-206ENST00000571995 PXDNQ92626 1479 aa19.07■□□□□ 0.64
RAB40B-206ENST00000571995 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.06■□□□□ 0.64
RAB40B-206ENST00000571995 KLF18A0A0U1RQI7 1052 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 KINO60870 393 aaKnown RBP19.06■□□□□ 0.64
RAB40B-206ENST00000571995 RPS6KB1P23443 525 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 AKAP17AQ02040 695 aaKnown RBP19.06■□□□□ 0.64
RAB40B-206ENST00000571995 CPLX2Q6PUV4 134 aaKnown RBP19.06■□□□□ 0.64
RAB40B-206ENST00000571995 TSC1Q92574 1164 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 EYA2O00167 538 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 PES1O00541 588 aaKnown RBP19.06■□□□□ 0.64
RAB40B-206ENST00000571995 LIG1P18858 919 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 XAGE2Q96GT9 111 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 MTMR6Q9Y217 621 aa19.06■□□□□ 0.64
RAB40B-206ENST00000571995 CYP21A2P08686 494 aa19.05■□□□□ 0.64
RAB40B-206ENST00000571995 IL15P40933 162 aaPredicted RBP19.05■□□□□ 0.64
RAB40B-206ENST00000571995 KRT32Q14532 448 aa19.05■□□□□ 0.64
RAB40B-206ENST00000571995 ZBTB1Q9Y2K1 713 aa19.05■□□□□ 0.64
RAB40B-206ENST00000571995 PCDH11XQ9BZA7 1347 aa19.05■□□□□ 0.64
RAB40B-206ENST00000571995 PCDH11YQ9BZA8 1340 aa19.05■□□□□ 0.64
RAB40B-206ENST00000571995 CLCN1P35523 988 aa19.05■□□□□ 0.64
RAB40B-206ENST00000571995 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.05■□□□□ 0.64
RAB40B-206ENST00000571995 DDB1Q16531 1140 aa19.04■□□□□ 0.64
RAB40B-206ENST00000571995 DNAJC25Q9H1X3 360 aa19.04■□□□□ 0.64
RAB40B-206ENST00000571995 MARCKSP29966 332 aaPredicted RBP19.04■□□□□ 0.64
RAB40B-206ENST00000571995 DHX16O60231 1041 aaKnown RBP19.04■□□□□ 0.64
RAB40B-206ENST00000571995 HLFQ16534 295 aa19.04■□□□□ 0.64
RAB40B-206ENST00000571995 NAPBQ9H115 298 aa19.04■□□□□ 0.64
RAB40B-206ENST00000571995 PTPDC1A2A3K4 754 aa19.03■□□□□ 0.64
RAB40B-206ENST00000571995 CUL4AQ13619 759 aa19.03■□□□□ 0.64
RAB40B-206ENST00000571995 TTC6Q86TZ1 520 aa19.03■□□□□ 0.64
RAB40B-206ENST00000571995 GREM2Q9H772 168 aa19.03■□□□□ 0.64
RAB40B-206ENST00000571995 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
RAB40B-206ENST00000571995 ERICH2A1L162 156 aa19.03■□□□□ 0.64
RAB40B-206ENST00000571995 CMTR1Q8N1G2 835 aaKnown RBP19.03■□□□□ 0.64
RAB40B-206ENST00000571995 ORC3Q9UBD5 711 aaPredicted RBP19.03■□□□□ 0.64
RAB40B-206ENST00000571995 PIGBQ92521 554 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 MAP4K1Q92918 833 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 hCG_1642624A0A1W2PR95 340 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
RAB40B-206ENST00000571995 ANO6Q4KMQ2 910 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 ZSWIM6Q9HCJ5 1215 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 AKAP2Q9Y2D5 859 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 FAM98CQ17RN3 349 aaKnown RBP19.02■□□□□ 0.64
RAB40B-206ENST00000571995 PDILTQ8N807 584 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 KBTBD3Q8NAB2 608 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 C8orf76Q96K31 380 aa19.02■□□□□ 0.64
RAB40B-206ENST00000571995 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
RAB40B-206ENST00000571995 UQCRHLA0A096LP55 91 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 UQCRHP07919 91 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 ZNF445P59923 1031 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.01■□□□□ 0.63
RAB40B-206ENST00000571995 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 RANBP6O60518 1105 aaKnown RBP19.01■□□□□ 0.63
RAB40B-206ENST00000571995 PRDM1O75626 825 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 VSIG10Q8N0Z9 540 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 G3V3G9 751 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 NECTIN1Q15223 517 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 DCAF8Q5TAQ9 597 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 FSIP1Q8NA03 581 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 AOX1Q06278 1338 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 ANKARQ7Z5J8 1434 aa19.01■□□□□ 0.63
RAB40B-206ENST00000571995 SALL3Q9BXA9 1300 aa19■□□□□ 0.63
RAB40B-206ENST00000571995 CEMIPQ8WUJ3 1361 aa19■□□□□ 0.63
RAB40B-206ENST00000571995 SMC2O95347 1197 aa19■□□□□ 0.63
RAB40B-206ENST00000571995 ATP5JP18859 108 aa19■□□□□ 0.63
RAB40B-206ENST00000571995 IFIT3O14879 490 aaKnown RBP19■□□□□ 0.63
RAB40B-206ENST00000571995 PRC1O43663 620 aa19■□□□□ 0.63
RAB40B-206ENST00000571995 GOLGA6L6A8MZA4 724 aa19■□□□□ 0.63
RAB40B-206ENST00000571995 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
RAB40B-206ENST00000571995 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
RAB40B-206ENST00000571995 B4E1Z4 1266 aa18.99■□□□□ 0.63
RAB40B-206ENST00000571995 MAGEB6Q8N7X4 407 aa18.99■□□□□ 0.63
RAB40B-206ENST00000571995 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
RAB40B-206ENST00000571995 COPRSQ9NQ92 184 aa18.99■□□□□ 0.63
RAB40B-206ENST00000571995 SEC31BQ9NQW1 1179 aa18.99■□□□□ 0.63
RAB40B-206ENST00000571995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms