RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SPACA7Q96KW9 195 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 SMG9Q9H0W8 520 aaKnown RBP6.72□□□□□ -1.33
CDC27-213ENST00000571643 C1orf115Q9H7X2 142 aa6.72□□□□□ -1.33
CDC27-213ENST00000571643 HYAL2Q12891 473 aa6.71□□□□□ -1.34
CDC27-213ENST00000571643 RSPO4Q2I0M5 234 aaPredicted RBP6.71□□□□□ -1.34
CDC27-213ENST00000571643 MAP4K3Q8IVH8 894 aa6.71□□□□□ -1.34
CDC27-213ENST00000571643 GPR152Q8TDT2 470 aa6.71□□□□□ -1.34
CDC27-213ENST00000571643 PLD4Q96BZ4 506 aa6.71□□□□□ -1.34
CDC27-213ENST00000571643 NSUN5Q96P11 429 aaKnown RBP6.71□□□□□ -1.34
CDC27-213ENST00000571643 ABI2Q9NYB9 513 aaPredicted RBP6.71□□□□□ -1.34
CDC27-213ENST00000571643 SEPT3Q9UH03 358 aa6.71□□□□□ -1.34
CDC27-213ENST00000571643 PDE4CQ08493 712 aa6.7□□□□□ -1.34
CDC27-213ENST00000571643 GRIK4Q16099 956 aa6.7□□□□□ -1.34
CDC27-213ENST00000571643 GRIK5Q16478 980 aa6.7□□□□□ -1.34
CDC27-213ENST00000571643 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
CDC27-213ENST00000571643 DMRTC2Q8IXT2 367 aaPredicted RBP6.7□□□□□ -1.34
CDC27-213ENST00000571643 LENG1Q96BZ8 264 aaPredicted RBP6.7□□□□□ -1.34
CDC27-213ENST00000571643 MUC3BQ9H195 1237 aa6.7□□□□□ -1.34
CDC27-213ENST00000571643 CCDC180Q9P1Z9 1646 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 SCNN1AP37088 669 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 SF3B2Q13435 895 aaKnown RBP6.69□□□□□ -1.34
CDC27-213ENST00000571643 ADGRE1Q14246 886 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 FAM26DQ5JW98 314 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 HFE2Q6ZVN8 426 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 ILDR2Q71H61 639 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 TXNRD3Q86VQ6 643 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 NUDT16Q96DE0 195 aaKnown RBP6.69□□□□□ -1.34
CDC27-213ENST00000571643 SEMA6BQ9H3T3 888 aa6.69□□□□□ -1.34
CDC27-213ENST00000571643 FAM177BA6PVY3 158 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 SMNDC1O75940 238 aaKnown RBP eCLIP6.68□□□□□ -1.34
CDC27-213ENST00000571643 FAM13AO94988 1023 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 KIF4AO95239 1232 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 MZF1P28698 734 aaPredicted RBP6.68□□□□□ -1.34
CDC27-213ENST00000571643 USP5P45974 858 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 DOC2BQ14184 412 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 MBTPS1Q14703 1052 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 ZNF438Q7Z4V0 828 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 GTF3C2Q8WUA4 911 aaPredicted RBP6.68□□□□□ -1.34
CDC27-213ENST00000571643 USP21Q9UK80 565 aa6.68□□□□□ -1.34
CDC27-213ENST00000571643 SELPP16109 830 aa6.67□□□□□ -1.34
CDC27-213ENST00000571643 EHHADHQ08426 723 aa6.67□□□□□ -1.34
CDC27-213ENST00000571643 XKR5Q6UX68 686 aa6.67□□□□□ -1.34
CDC27-213ENST00000571643 PMEPA1Q969W9 287 aa6.67□□□□□ -1.34
CDC27-213ENST00000571643 PSMG3-AS1Q96PY0 264 aa6.67□□□□□ -1.34
CDC27-213ENST00000571643 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
CDC27-213ENST00000571643 J3QW42 95 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 ZBTB39O15060 712 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 NPR3P17342 541 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 MPSTP25325 297 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 EIF1AXP47813 144 aaKnown RBP6.66□□□□□ -1.34
CDC27-213ENST00000571643 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 IGF2-ASQ6U949 168 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 EDEM1Q92611 657 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 ELP3Q9H9T3 547 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
CDC27-213ENST00000571643 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
CDC27-213ENST00000571643 DYRK3O43781 588 aa6.65□□□□□ -1.34
CDC27-213ENST00000571643 PDGFAP04085 211 aa6.65□□□□□ -1.34
CDC27-213ENST00000571643 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
CDC27-213ENST00000571643 FOXD4L6Q3SYB3 417 aaPredicted RBP6.65□□□□□ -1.34
CDC27-213ENST00000571643 GDF6Q6KF10 455 aaPredicted RBP6.65□□□□□ -1.34
CDC27-213ENST00000571643 FOXD4L3Q6VB84 417 aaPredicted RBP6.65□□□□□ -1.34
CDC27-213ENST00000571643 NCAPG2Q86XI2 1143 aa6.65□□□□□ -1.34
CDC27-213ENST00000571643 IL22RA1Q8N6P7 574 aa6.65□□□□□ -1.34
CDC27-213ENST00000571643 EGFL7Q9UHF1 273 aa6.65□□□□□ -1.34
CDC27-213ENST00000571643 AAMPQ13685 434 aa6.64□□□□□ -1.35
CDC27-213ENST00000571643 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
CDC27-213ENST00000571643 MRPL18Q9H0U6 180 aaKnown RBP6.64□□□□□ -1.35
CDC27-213ENST00000571643 PPME1Q9Y570 386 aa6.64□□□□□ -1.35
CDC27-213ENST00000571643 PTPRAP18433 802 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 FKBP4Q02790 459 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDC27-213ENST00000571643 C8orf34Q49A92 452 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 CEP135Q66GS9 1140 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 FAM117BQ6P1L5 589 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 SNX29Q8TEQ0 813 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
CDC27-213ENST00000571643 DLL1O00548 723 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 ABL1P00519 1130 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 CES1P23141 567 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 CDC27P30260 824 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 PBX4Q9BYU1 374 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 TRIM33Q9UPN9 1127 aa6.62□□□□□ -1.35
CDC27-213ENST00000571643 DEAF1O75398 565 aaPredicted RBP6.61□□□□□ -1.35
CDC27-213ENST00000571643 CABP4P57796 275 aa6.61□□□□□ -1.35
CDC27-213ENST00000571643 ATP11AP98196 1134 aa6.61□□□□□ -1.35
CDC27-213ENST00000571643 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
CDC27-213ENST00000571643 PHLDB3Q6NSJ2 640 aa6.61□□□□□ -1.35
CDC27-213ENST00000571643 CEP120Q8N960 986 aa6.61□□□□□ -1.35
CDC27-213ENST00000571643 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
CDC27-213ENST00000571643 POLIQ9UNA4 740 aa6.61□□□□□ -1.35
CDC27-213ENST00000571643 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
CDC27-213ENST00000571643 ARTNQ5T4W7 220 aa6.6□□□□□ -1.35
CDC27-213ENST00000571643 TMEM130Q8N3G9 435 aa6.6□□□□□ -1.35
CDC27-213ENST00000571643 KLHL23Q8NBE8 558 aa6.6□□□□□ -1.35
CDC27-213ENST00000571643 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
CDC27-213ENST00000571643 SALL4Q9UJQ4 1053 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms