RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 EFCC1Q9HA90 598 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 ABCC10Q5T3U5 1492 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 SPDYE3A6NKU9 549 aa8.21□□□□□ -1.1
KARSP3-201ENST00000571212 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
KARSP3-201ENST00000571212 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
KARSP3-201ENST00000571212 FAM35AQ86V20 835 aa8.21□□□□□ -1.1
KARSP3-201ENST00000571212 ETFBKMTQ8IXQ9 262 aa8.21□□□□□ -1.1
KARSP3-201ENST00000571212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.21□□□□□ -1.1
KARSP3-201ENST00000571212 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
KARSP3-201ENST00000571212 RARAP10276 462 aa8.2□□□□□ -1.1
KARSP3-201ENST00000571212 HFE2Q6ZVN8 426 aa8.2□□□□□ -1.1
KARSP3-201ENST00000571212 CXXC1Q9P0U4 656 aaPredicted RBP8.2□□□□□ -1.1
KARSP3-201ENST00000571212 DIP2BQ9P265 1576 aa8.2□□□□□ -1.1
KARSP3-201ENST00000571212 GATA4P43694 442 aa8.19□□□□□ -1.1
KARSP3-201ENST00000571212 CCDC97Q96F63 343 aaPredicted RBP8.19□□□□□ -1.1
KARSP3-201ENST00000571212 ADCY10Q96PN6 1610 aa8.19□□□□□ -1.1
KARSP3-201ENST00000571212 KIAA0586Q9BVV6 1533 aa8.19□□□□□ -1.1
KARSP3-201ENST00000571212 XYLBO75191 536 aa8.19□□□□□ -1.1
KARSP3-201ENST00000571212 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
KARSP3-201ENST00000571212 MAP3K6O95382 1288 aa8.19□□□□□ -1.1
KARSP3-201ENST00000571212 DMRTC2Q8IXT2 367 aaPredicted RBP8.19□□□□□ -1.1
KARSP3-201ENST00000571212 KCNMB2Q9Y691 235 aa8.19□□□□□ -1.1
KARSP3-201ENST00000571212 A0A0A0MRY4 1105 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 APBA3O96018 575 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 C16orf46Q6P387 395 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 LPIN3Q9BQK8 851 aa8.18□□□□□ -1.1
KARSP3-201ENST00000571212 CUL7Q14999 1698 aa8.17□□□□□ -1.1
KARSP3-201ENST00000571212 TNFRSF10BO14763 440 aa8.17□□□□□ -1.1
KARSP3-201ENST00000571212 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
KARSP3-201ENST00000571212 SELPP16109 830 aa8.16□□□□□ -1.1
KARSP3-201ENST00000571212 BRD2P25440 801 aaKnown RBP8.16□□□□□ -1.1
KARSP3-201ENST00000571212 GRIK5Q16478 980 aa8.16□□□□□ -1.1
KARSP3-201ENST00000571212 SERPINA10Q9UK55 444 aa8.16□□□□□ -1.1
KARSP3-201ENST00000571212 TSPOAP1O95153 1857 aa8.16□□□□□ -1.1
KARSP3-201ENST00000571212 KDM6BO15054 1643 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 J3QW42 95 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 MMP20O60882 483 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 EGFRP00533 1210 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 ITGB7P26010 798 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 GPLD1P80108 840 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 TRIP4Q15650 581 aaPredicted RBP8.15□□□□□ -1.1
KARSP3-201ENST00000571212 CLP1Q92989 425 aaKnown RBP8.15□□□□□ -1.1
KARSP3-201ENST00000571212 C11orf16Q9NQ32 467 aa8.15□□□□□ -1.1
KARSP3-201ENST00000571212 KIF27Q86VH2 1401 aa8.15□□□□□ -1.11
KARSP3-201ENST00000571212 ZBTB39O15060 712 aa8.14□□□□□ -1.11
KARSP3-201ENST00000571212 SCNN1AP37088 669 aa8.14□□□□□ -1.11
KARSP3-201ENST00000571212 ELMSAN1Q6PJG2 1045 aa8.14□□□□□ -1.11
KARSP3-201ENST00000571212 ILDR2Q71H61 639 aa8.14□□□□□ -1.11
KARSP3-201ENST00000571212 SEMA6BQ9H3T3 888 aa8.14□□□□□ -1.11
KARSP3-201ENST00000571212 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
KARSP3-201ENST00000571212 TLR7Q9NYK1 1049 aaKnown RBP8.14□□□□□ -1.11
KARSP3-201ENST00000571212 PCSK7Q16549 785 aa8.13□□□□□ -1.11
KARSP3-201ENST00000571212 MSL1Q68DK7 614 aa8.13□□□□□ -1.11
KARSP3-201ENST00000571212 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
KARSP3-201ENST00000571212 NSUN5Q96P11 429 aaKnown RBP8.13□□□□□ -1.11
KARSP3-201ENST00000571212 SMG9Q9H0W8 520 aaKnown RBP8.13□□□□□ -1.11
KARSP3-201ENST00000571212 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
KARSP3-201ENST00000571212 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
KARSP3-201ENST00000571212 NRLP54845 237 aa8.13□□□□□ -1.11
KARSP3-201ENST00000571212 CCDC82Q8N4S0 544 aa8.13□□□□□ -1.11
KARSP3-201ENST00000571212 PTPRGP23470 1445 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 ELNP15502 786 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 ATP2B4P23634 1241 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 RAC1P63000 192 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 RSPO4Q2I0M5 234 aaPredicted RBP8.12□□□□□ -1.11
KARSP3-201ENST00000571212 FMR1NBQ8N0W7 255 aaPredicted RBP8.12□□□□□ -1.11
KARSP3-201ENST00000571212 NACC1Q96RE7 527 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 FRRS1LQ9P0K9 344 aa8.12□□□□□ -1.11
KARSP3-201ENST00000571212 PTCD1O75127 700 aaKnown RBP8.11□□□□□ -1.11
KARSP3-201ENST00000571212 PSAPP07602 524 aa8.11□□□□□ -1.11
KARSP3-201ENST00000571212 ZAP70P43403 619 aa8.11□□□□□ -1.11
KARSP3-201ENST00000571212 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 UBAP1LF5GYI3 381 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 SIK1P57059 783 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 CARMIL2Q6F5E8 1435 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 GPR152Q8TDT2 470 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 ABCC2Q92887 1545 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 STIM2Q9P246 746 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 CARMIL1Q5VZK9 1371 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
KARSP3-201ENST00000571212 GLI2P10070 1586 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 C9orf172C9J069 976 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 NKAPLQ5M9Q1 402 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 NLRP13Q86W25 1043 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 PLD4Q96BZ4 506 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 IQGAP2Q13576 1575 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 UHRF1BP1LA0JNW5 1464 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 PLB1Q6P1J6 1458 aa8.09□□□□□ -1.11
KARSP3-201ENST00000571212 COL13A1Q5TAT6 717 aaPredicted RBP8.08□□□□□ -1.12
KARSP3-201ENST00000571212 GDF6Q6KF10 455 aaPredicted RBP8.08□□□□□ -1.12
KARSP3-201ENST00000571212 ATCAYQ86WG3 371 aa8.08□□□□□ -1.12
KARSP3-201ENST00000571212 PIK3R5Q8WYR1 880 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms