RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 KIF23Q02241 960 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-214ENST00000566230 NEUROD2Q15784 382 aa17.46■□□□□ 0.39
COMMD4-214ENST00000566230 RTL5Q5HYW3 569 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-214ENST00000566230 TBC1D16Q8TBP0 767 aa17.46■□□□□ 0.39
COMMD4-214ENST00000566230 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
COMMD4-214ENST00000566230 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
COMMD4-214ENST00000566230 C2orf69Q8N8R5 385 aa17.45■□□□□ 0.38
COMMD4-214ENST00000566230 DCPSQ96C86 337 aaKnown RBP17.45■□□□□ 0.38
COMMD4-214ENST00000566230 LAS1LQ9Y4W2 734 aaKnown RBP17.45■□□□□ 0.38
COMMD4-214ENST00000566230 ASTN2O75129 1339 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-214ENST00000566230 VIL1P09327 827 aaKnown RBP17.44■□□□□ 0.38
COMMD4-214ENST00000566230 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
COMMD4-214ENST00000566230 TRIM28Q13263 835 aaKnown RBP17.44■□□□□ 0.38
COMMD4-214ENST00000566230 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
COMMD4-214ENST00000566230 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-214ENST00000566230 HOXB7P09629 217 aa17.43■□□□□ 0.38
COMMD4-214ENST00000566230 ZNF157P51786 506 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-214ENST00000566230 EYA3Q99504 573 aa17.43■□□□□ 0.38
COMMD4-214ENST00000566230 RNF186Q9NXI6 227 aa17.43■□□□□ 0.38
COMMD4-214ENST00000566230 SAGE1Q9NXZ1 904 aa17.43■□□□□ 0.38
COMMD4-214ENST00000566230 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-214ENST00000566230 PSME4Q14997 1843 aa17.42■□□□□ 0.38
COMMD4-214ENST00000566230 TRPA1O75762 1119 aa17.42■□□□□ 0.38
COMMD4-214ENST00000566230 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
COMMD4-214ENST00000566230 SEC31BQ9NQW1 1179 aa17.42■□□□□ 0.38
COMMD4-214ENST00000566230 GGA3Q9NZ52 723 aa17.42■□□□□ 0.38
COMMD4-214ENST00000566230 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
COMMD4-214ENST00000566230 CSRNP1Q96S65 589 aa17.41■□□□□ 0.38
COMMD4-214ENST00000566230 ZC3H12CQ9C0D7 883 aaKnown RBP17.41■□□□□ 0.38
COMMD4-214ENST00000566230 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
COMMD4-214ENST00000566230 SLC10A3P09131 477 aa17.4■□□□□ 0.38
COMMD4-214ENST00000566230 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
COMMD4-214ENST00000566230 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
COMMD4-214ENST00000566230 CDCA5Q96FF9 252 aa17.4■□□□□ 0.38
COMMD4-214ENST00000566230 UFL1O94874 794 aa17.39■□□□□ 0.37
COMMD4-214ENST00000566230 ZNF280AP59817 542 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-214ENST00000566230 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
COMMD4-214ENST00000566230 SCARF1Q14162 830 aa17.38■□□□□ 0.37
COMMD4-214ENST00000566230 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-214ENST00000566230 ZNF609O15014 1411 aa17.38■□□□□ 0.37
COMMD4-214ENST00000566230 SOX10P56693 466 aa17.37■□□□□ 0.37
COMMD4-214ENST00000566230 ANGEL2Q5VTE6 544 aaKnown RBP17.37■□□□□ 0.37
COMMD4-214ENST00000566230 RSBN1LQ6PCB5 846 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-214ENST00000566230 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
COMMD4-214ENST00000566230 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-214ENST00000566230 GMLQ99445 158 aa17.37■□□□□ 0.37
COMMD4-214ENST00000566230 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
COMMD4-214ENST00000566230 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
COMMD4-214ENST00000566230 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
COMMD4-214ENST00000566230 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
COMMD4-214ENST00000566230 G3V3G9 751 aa17.36■□□□□ 0.37
COMMD4-214ENST00000566230 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
COMMD4-214ENST00000566230 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
COMMD4-214ENST00000566230 RASAL3Q86YV0 1011 aa17.36■□□□□ 0.37
COMMD4-214ENST00000566230 ADAMTS8Q9UP79 889 aa17.36■□□□□ 0.37
COMMD4-214ENST00000566230 PCCAP05165 728 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-214ENST00000566230 MYD88Q99836 296 aa17.35■□□□□ 0.37
COMMD4-214ENST00000566230 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-214ENST00000566230 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
COMMD4-214ENST00000566230 PAPPA2Q9BXP8 1791 aa17.35■□□□□ 0.37
COMMD4-214ENST00000566230 WTIPA6NIX2 430 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-214ENST00000566230 ZNF646O15015 1829 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-214ENST00000566230 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
COMMD4-214ENST00000566230 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
COMMD4-214ENST00000566230 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
COMMD4-214ENST00000566230 CTU1Q7Z7A3 348 aaKnown RBP17.34■□□□□ 0.37
COMMD4-214ENST00000566230 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-214ENST00000566230 SCAF8Q9UPN6 1271 aaKnown RBP17.34■□□□□ 0.37
COMMD4-214ENST00000566230 PDE8AO60658 829 aa17.33■□□□□ 0.36
COMMD4-214ENST00000566230 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
COMMD4-214ENST00000566230 FKBP1BP68106 108 aa17.33■□□□□ 0.36
COMMD4-214ENST00000566230 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
COMMD4-214ENST00000566230 REM2Q8IYK8 340 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-214ENST00000566230 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
COMMD4-214ENST00000566230 MYOZ2Q9NPC6 264 aa17.33■□□□□ 0.36
COMMD4-214ENST00000566230 XDHP47989 1333 aa17.32■□□□□ 0.36
COMMD4-214ENST00000566230 PITPNM2Q9BZ72 1349 aa17.32■□□□□ 0.36
COMMD4-214ENST00000566230 ELL2O00472 640 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-214ENST00000566230 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
COMMD4-214ENST00000566230 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
COMMD4-214ENST00000566230 SPEF2Q9C093 1822 aa17.32■□□□□ 0.36
COMMD4-214ENST00000566230 USP17L3A6NCW0 530 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 PRAMEF18Q5VWM3 479 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 CWC25Q9NXE8 425 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-214ENST00000566230 PCDH10Q9P2E7 1040 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 MYH3P11055 1940 aa17.31■□□□□ 0.36
COMMD4-214ENST00000566230 ATP2B4P23634 1241 aa17.3■□□□□ 0.36
COMMD4-214ENST00000566230 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
COMMD4-214ENST00000566230 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
COMMD4-214ENST00000566230 ANKRD18AQ8IVF6 992 aa17.3■□□□□ 0.36
COMMD4-214ENST00000566230 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-214ENST00000566230 C8orf58Q8NAV2 365 aa17.29■□□□□ 0.36
COMMD4-214ENST00000566230 MXD3Q9BW11 206 aa17.29■□□□□ 0.36
COMMD4-214ENST00000566230 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
COMMD4-214ENST00000566230 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
COMMD4-214ENST00000566230 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
COMMD4-214ENST00000566230 ZNF296Q8WUU4 475 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms