RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 RIPK4P57078 832 aa20.59■□□□□ 0.89
EDC3-210ENST00000566219 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
EDC3-210ENST00000566219 SULF1Q8IWU6 871 aa20.58■□□□□ 0.89
EDC3-210ENST00000566219 FAM89AQ96GI7 184 aa20.58■□□□□ 0.89
EDC3-210ENST00000566219 EYA3Q99504 573 aa20.58■□□□□ 0.89
EDC3-210ENST00000566219 PAPPA2Q9BXP8 1791 aa20.57■□□□□ 0.88
EDC3-210ENST00000566219 CTU1Q7Z7A3 348 aaKnown RBP20.57■□□□□ 0.88
EDC3-210ENST00000566219 CDCA5Q96FF9 252 aa20.57■□□□□ 0.88
EDC3-210ENST00000566219 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
EDC3-210ENST00000566219 PSME4Q14997 1843 aa20.57■□□□□ 0.88
EDC3-210ENST00000566219 SF3B3Q15393 1217 aaKnown RBP20.56■□□□□ 0.88
EDC3-210ENST00000566219 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
EDC3-210ENST00000566219 RASAL3Q86YV0 1011 aa20.56■□□□□ 0.88
EDC3-210ENST00000566219 CSRNP1Q96S65 589 aa20.56■□□□□ 0.88
EDC3-210ENST00000566219 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
EDC3-210ENST00000566219 BABAM1Q9NWV8 329 aa20.56■□□□□ 0.88
EDC3-210ENST00000566219 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
EDC3-210ENST00000566219 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
EDC3-210ENST00000566219 PRPF38BQ5VTL8 546 aaKnown RBP20.54■□□□□ 0.88
EDC3-210ENST00000566219 PLBD2Q8NHP8 589 aa20.54■□□□□ 0.88
EDC3-210ENST00000566219 ISCA1Q9BUE6 129 aa20.54■□□□□ 0.88
EDC3-210ENST00000566219 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
EDC3-210ENST00000566219 ANGEL2Q5VTE6 544 aaKnown RBP20.53■□□□□ 0.88
EDC3-210ENST00000566219 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
EDC3-210ENST00000566219 UFL1O94874 794 aa20.52■□□□□ 0.88
EDC3-210ENST00000566219 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
EDC3-210ENST00000566219 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
EDC3-210ENST00000566219 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.88
EDC3-210ENST00000566219 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
EDC3-210ENST00000566219 G3V3G9 751 aa20.51■□□□□ 0.87
EDC3-210ENST00000566219 IRS4O14654 1257 aaPredicted RBP20.51■□□□□ 0.87
EDC3-210ENST00000566219 DCAF8Q5TAQ9 597 aa20.51■□□□□ 0.87
EDC3-210ENST00000566219 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
EDC3-210ENST00000566219 ZC3H12CQ9C0D7 883 aaKnown RBP20.51■□□□□ 0.87
EDC3-210ENST00000566219 ZNF609O15014 1411 aa20.51■□□□□ 0.87
EDC3-210ENST00000566219 RPS8P62241 208 aaKnown RBP20.5■□□□□ 0.87
EDC3-210ENST00000566219 SCARF1Q14162 830 aa20.5■□□□□ 0.87
EDC3-210ENST00000566219 LAS1LQ9Y4W2 734 aaKnown RBP20.5■□□□□ 0.87
EDC3-210ENST00000566219 ZNF280AP59817 542 aaPredicted RBP20.49■□□□□ 0.87
EDC3-210ENST00000566219 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
EDC3-210ENST00000566219 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
EDC3-210ENST00000566219 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
EDC3-210ENST00000566219 ANKIB1Q9P2G1 1089 aa20.49■□□□□ 0.87
EDC3-210ENST00000566219 GGA1Q9UJY5 639 aa20.49■□□□□ 0.87
EDC3-210ENST00000566219 SCAF8Q9UPN6 1271 aaKnown RBP20.49■□□□□ 0.87
EDC3-210ENST00000566219 MOB2Q70IA6 237 aa20.48■□□□□ 0.87
EDC3-210ENST00000566219 REM2Q8IYK8 340 aaPredicted RBP20.48■□□□□ 0.87
EDC3-210ENST00000566219 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
EDC3-210ENST00000566219 HDAC9Q9UKV0 1011 aa20.48■□□□□ 0.87
EDC3-210ENST00000566219 CHL1O00533 1208 aa20.47■□□□□ 0.87
EDC3-210ENST00000566219 FKBP1BP68106 108 aa20.47■□□□□ 0.87
EDC3-210ENST00000566219 AGBL3Q8NEM8 1001 aa20.47■□□□□ 0.87
EDC3-210ENST00000566219 DBF4Q9UBU7 674 aaPredicted RBP20.47■□□□□ 0.87
EDC3-210ENST00000566219 SPEF2Q9C093 1822 aa20.46■□□□□ 0.87
EDC3-210ENST00000566219 TBC1D8O95759 1140 aa20.46■□□□□ 0.87
EDC3-210ENST00000566219 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
EDC3-210ENST00000566219 ZNF296Q8WUU4 475 aaPredicted RBP20.46■□□□□ 0.87
EDC3-210ENST00000566219 MYOZ2Q9NPC6 264 aa20.46■□□□□ 0.87
EDC3-210ENST00000566219 PITPNM2Q9BZ72 1349 aa20.46■□□□□ 0.87
EDC3-210ENST00000566219 ZNF646O15015 1829 aaPredicted RBP20.45■□□□□ 0.86
EDC3-210ENST00000566219 UBE2Q2LH0YL09 131 aa20.44■□□□□ 0.86
EDC3-210ENST00000566219 ANP32CO43423 234 aa20.44■□□□□ 0.86
EDC3-210ENST00000566219 HOXB7P09629 217 aa20.44■□□□□ 0.86
EDC3-210ENST00000566219 USP17L8P0C7I0 530 aa20.44■□□□□ 0.86
EDC3-210ENST00000566219 PKN2Q16513 984 aaKnown RBP20.44■□□□□ 0.86
EDC3-210ENST00000566219 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
EDC3-210ENST00000566219 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
EDC3-210ENST00000566219 GMLQ99445 158 aa20.44■□□□□ 0.86
EDC3-210ENST00000566219 MKRN3Q13064 507 aaKnown RBP20.43■□□□□ 0.86
EDC3-210ENST00000566219 TTLL12Q14166 644 aaPredicted RBP20.43■□□□□ 0.86
EDC3-210ENST00000566219 ZBTB38Q8NAP3 1195 aaPredicted RBP20.43■□□□□ 0.86
EDC3-210ENST00000566219 HYPKQ9NX55 129 aa20.43■□□□□ 0.86
EDC3-210ENST00000566219 TRIM28Q13263 835 aaKnown RBP20.42■□□□□ 0.86
EDC3-210ENST00000566219 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
EDC3-210ENST00000566219 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 DUSP27Q5VZP5 1158 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 XDHP47989 1333 aa20.41■□□□□ 0.86
EDC3-210ENST00000566219 GPR25O00155 361 aa20.4■□□□□ 0.86
EDC3-210ENST00000566219 NBPF9Q3BBW0 867 aa20.4■□□□□ 0.86
EDC3-210ENST00000566219 JARID2Q92833 1246 aaPredicted RBP20.4■□□□□ 0.86
EDC3-210ENST00000566219 MYD88Q99836 296 aa20.4■□□□□ 0.86
EDC3-210ENST00000566219 HSP90B1P14625 803 aaKnown RBP20.39■□□□□ 0.85
EDC3-210ENST00000566219 FBXO46Q6PJ61 603 aaPredicted RBP20.39■□□□□ 0.85
EDC3-210ENST00000566219 MYH3P11055 1940 aa20.38■□□□□ 0.85
EDC3-210ENST00000566219 PDE8AO60658 829 aa20.38■□□□□ 0.85
EDC3-210ENST00000566219 ANKRD18AQ8IVF6 992 aa20.38■□□□□ 0.85
EDC3-210ENST00000566219 FBXW7Q969H0 707 aa20.38■□□□□ 0.85
EDC3-210ENST00000566219 MXD3Q9BW11 206 aa20.38■□□□□ 0.85
EDC3-210ENST00000566219 PCCAP05165 728 aaPredicted RBP20.37■□□□□ 0.85
EDC3-210ENST00000566219 ATP2B4P23634 1241 aa20.37■□□□□ 0.85
EDC3-210ENST00000566219 PODNQ7Z5L7 613 aa20.37■□□□□ 0.85
EDC3-210ENST00000566219 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
EDC3-210ENST00000566219 HTTP42858 3142 aa20.37■□□□□ 0.85
EDC3-210ENST00000566219 MED23Q9ULK4 1368 aa20.36■□□□□ 0.85
EDC3-210ENST00000566219 SASH1O94885 1247 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms