RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 RFX7Q2KHR2 1363 aa23.7■■□□□ 1.38
CLN6-205ENST00000564846 PDE8BO95263 885 aa23.7■■□□□ 1.38
CLN6-205ENST00000564846 IGHMBP2P38935 993 aaKnown RBP23.7■■□□□ 1.38
CLN6-205ENST00000564846 RABEP1Q15276 862 aa23.7■■□□□ 1.38
CLN6-205ENST00000564846 TICAM2Q86XR7 235 aa23.7■■□□□ 1.38
CLN6-205ENST00000564846 GORABQ5T7V8 394 aa23.69■■□□□ 1.38
CLN6-205ENST00000564846 XAGE2Q96GT9 111 aa23.69■■□□□ 1.38
CLN6-205ENST00000564846 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
CLN6-205ENST00000564846 IL25Q9H293 177 aa23.69■■□□□ 1.38
CLN6-205ENST00000564846 SEC31BQ9NQW1 1179 aa23.69■■□□□ 1.38
CLN6-205ENST00000564846 ABCC12Q96J65 1359 aa23.69■■□□□ 1.38
CLN6-205ENST00000564846 KIAA1211Q6ZU35 1233 aa23.68■■□□□ 1.38
CLN6-205ENST00000564846 PROM2Q8N271 834 aa23.68■■□□□ 1.38
CLN6-205ENST00000564846 HSCBQ8IWL3 235 aa23.68■■□□□ 1.38
CLN6-205ENST00000564846 DNAJC2Q99543 621 aaKnown RBP23.68■■□□□ 1.38
CLN6-205ENST00000564846 RGS17Q9UGC6 210 aaPredicted RBP23.68■■□□□ 1.38
CLN6-205ENST00000564846 RAD50Q92878 1312 aa23.67■■□□□ 1.38
CLN6-205ENST00000564846 UBR3Q6ZT12 1888 aa23.67■■□□□ 1.38
CLN6-205ENST00000564846 IFIT1P09914 478 aaKnown RBP23.67■■□□□ 1.38
CLN6-205ENST00000564846 CARMIL3Q8ND23 1372 aa23.67■■□□□ 1.38
CLN6-205ENST00000564846 APBA3O96018 575 aa23.66■■□□□ 1.38
CLN6-205ENST00000564846 ANAPC15P60006 121 aa23.66■■□□□ 1.38
CLN6-205ENST00000564846 TTC39AQ5SRH9 613 aa23.66■■□□□ 1.38
CLN6-205ENST00000564846 NLRP3Q96P20 1036 aa23.66■■□□□ 1.38
CLN6-205ENST00000564846 SNRKQ9NRH2 765 aa23.66■■□□□ 1.38
CLN6-205ENST00000564846 ADORA1P30542 326 aa23.65■■□□□ 1.38
CLN6-205ENST00000564846 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
CLN6-205ENST00000564846 EDC3Q96F86 508 aaKnown RBP23.65■■□□□ 1.38
CLN6-205ENST00000564846 EP400Q96L91 3159 aa23.65■■□□□ 1.38
CLN6-205ENST00000564846 KBTBD3Q8NAB2 608 aa23.65■■□□□ 1.38
CLN6-205ENST00000564846 LSG1Q9H089 658 aaKnown RBP23.65■■□□□ 1.38
CLN6-205ENST00000564846 PAG1Q9NWQ8 432 aa23.65■■□□□ 1.38
CLN6-205ENST00000564846 NMIQ13287 307 aaPredicted RBP23.64■■□□□ 1.37
CLN6-205ENST00000564846 NFIXQ14938 502 aa23.64■■□□□ 1.37
CLN6-205ENST00000564846 LPIN2Q92539 896 aa23.64■■□□□ 1.37
CLN6-205ENST00000564846 ZNF512BQ96KM6 892 aaPredicted RBP23.64■■□□□ 1.37
CLN6-205ENST00000564846 C3orf67Q6ZVT6 689 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 IL17RAQ96F46 866 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 FGFR2P21802 821 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 HSPA4P34932 840 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 POTEAQ6S8J7 498 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 DDX46Q7L014 1031 aaKnown RBP23.63■■□□□ 1.37
CLN6-205ENST00000564846 ANKRD18AQ8IVF6 992 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 FAM227BQ96M60 508 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 NDUFB9Q9Y6M9 179 aa23.63■■□□□ 1.37
CLN6-205ENST00000564846 SPEF2Q9C093 1822 aa23.62■■□□□ 1.37
CLN6-205ENST00000564846 GOLIM4O00461 696 aa23.62■■□□□ 1.37
CLN6-205ENST00000564846 GYS1P13807 737 aa23.62■■□□□ 1.37
CLN6-205ENST00000564846 NPHP1O15259 732 aa23.61■■□□□ 1.37
CLN6-205ENST00000564846 SLC5A1P13866 664 aa23.6■■□□□ 1.37
CLN6-205ENST00000564846 BSDC1Q9NW68 430 aaPredicted RBP23.6■■□□□ 1.37
CLN6-205ENST00000564846 A0A0D9SFI3 127 aa23.6■■□□□ 1.37
CLN6-205ENST00000564846 IL27Q8NEV9 243 aa23.6■■□□□ 1.37
CLN6-205ENST00000564846 HELBQ8NG08 1087 aaPredicted RBP23.6■■□□□ 1.37
CLN6-205ENST00000564846 MED23Q9ULK4 1368 aa23.59■■□□□ 1.37
CLN6-205ENST00000564846 CNBD1Q8NA66 436 aa23.59■■□□□ 1.37
CLN6-205ENST00000564846 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
CLN6-205ENST00000564846 CHRNDQ07001 517 aa23.58■■□□□ 1.37
CLN6-205ENST00000564846 LRRFIP1Q32MZ4 808 aaKnown RBP23.58■■□□□ 1.37
CLN6-205ENST00000564846 AKT1S1Q96B36 256 aa23.58■■□□□ 1.37
CLN6-205ENST00000564846 CCDC171Q6TFL3 1326 aa23.58■■□□□ 1.36
CLN6-205ENST00000564846 ST18O60284 1047 aa23.57■■□□□ 1.36
CLN6-205ENST00000564846 UQCRFS1P1P0C7P4 283 aa23.57■■□□□ 1.36
CLN6-205ENST00000564846 PALD1Q9ULE6 856 aa23.57■■□□□ 1.36
CLN6-205ENST00000564846 TAF5LO75529 589 aa23.57■■□□□ 1.36
CLN6-205ENST00000564846 CCDC102BQ68D86 513 aa23.57■■□□□ 1.36
CLN6-205ENST00000564846 TFCP2L1Q9NZI6 479 aa23.57■■□□□ 1.36
CLN6-205ENST00000564846 ARAP2Q8WZ64 1704 aa23.56■■□□□ 1.36
CLN6-205ENST00000564846 K7ELQ4 463 aaPredicted RBP23.56■■□□□ 1.36
CLN6-205ENST00000564846 ARID4AP29374 1257 aaPredicted RBP23.56■■□□□ 1.36
CLN6-205ENST00000564846 TM4SF1P30408 202 aa23.56■■□□□ 1.36
CLN6-205ENST00000564846 MCMDC2Q4G0Z9 681 aa23.56■■□□□ 1.36
CLN6-205ENST00000564846 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
CLN6-205ENST00000564846 PTH1RQ03431 593 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 SCARF1Q14162 830 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 FLAD1Q8NFF5 587 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 MAP4K1Q92918 833 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 CD2BP2O95400 341 aaKnown RBP23.55■■□□□ 1.36
CLN6-205ENST00000564846 ZAP70P43403 619 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 ZNF827Q17R98 1081 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 CELF1Q92879 486 aaKnown RBP23.55■■□□□ 1.36
CLN6-205ENST00000564846 ANTXR1Q9H6X2 564 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 HELLSQ9NRZ9 838 aa23.55■■□□□ 1.36
CLN6-205ENST00000564846 RGPD3A6NKT7 1758 aaPredicted RBP23.54■■□□□ 1.36
CLN6-205ENST00000564846 RGPD4Q7Z3J3 1758 aa23.54■■□□□ 1.36
CLN6-205ENST00000564846 CASZ1Q86V15 1759 aa23.54■■□□□ 1.36
CLN6-205ENST00000564846 TNS1Q9HBL0 1735 aaKnown RBP23.54■■□□□ 1.36
CLN6-205ENST00000564846 MCAMP43121 646 aa23.54■■□□□ 1.36
CLN6-205ENST00000564846 PRR5LQ6MZQ0 368 aa23.54■■□□□ 1.36
CLN6-205ENST00000564846 CCDC24Q8N4L8 307 aa23.54■■□□□ 1.36
CLN6-205ENST00000564846 MINPP1Q9UNW1 487 aa23.54■■□□□ 1.36
CLN6-205ENST00000564846 COL4A1P02462 1669 aa23.53■■□□□ 1.36
CLN6-205ENST00000564846 RNF113AO15541 343 aaKnown RBP23.53■■□□□ 1.36
CLN6-205ENST00000564846 SERPINB2P05120 415 aa23.53■■□□□ 1.36
CLN6-205ENST00000564846 ZFYP08048 801 aaPredicted RBP23.53■■□□□ 1.36
CLN6-205ENST00000564846 PHKA1P46020 1223 aa23.53■■□□□ 1.36
CLN6-205ENST00000564846 TTF1Q15361 905 aaPredicted RBP23.53■■□□□ 1.36
CLN6-205ENST00000564846 ST5P78524 1137 aa23.52■■□□□ 1.36
CLN6-205ENST00000564846 ZMYM1Q5SVZ6 1142 aa23.52■■□□□ 1.36
CLN6-205ENST00000564846 ZNF589Q86UQ0 364 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms