RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
CDH5-204ENST00000563425 ERVV-1B6SEH8 477 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 ZNF445P59923 1031 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 ANKRD1Q15327 319 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 RREB1Q92766 1687 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 STX6O43752 255 aa23.3■■□□□ 1.32
CDH5-204ENST00000563425 SYT1P21579 422 aa23.3■■□□□ 1.32
CDH5-204ENST00000563425 ST3GAL1Q11201 340 aa23.3■■□□□ 1.32
CDH5-204ENST00000563425 DDB1Q16531 1140 aa23.3■■□□□ 1.32
CDH5-204ENST00000563425 ZSCAN22P10073 491 aaPredicted RBP23.29■■□□□ 1.32
CDH5-204ENST00000563425 TAF7LQ5H9L4 462 aa23.29■■□□□ 1.32
CDH5-204ENST00000563425 ZMYM1Q5SVZ6 1142 aa23.29■■□□□ 1.32
CDH5-204ENST00000563425 TTLL11Q8NHH1 800 aa23.29■■□□□ 1.32
CDH5-204ENST00000563425 CCDC85AQ96PX6 553 aaPredicted RBP23.29■■□□□ 1.32
CDH5-204ENST00000563425 MBD3O95983 291 aa23.29■■□□□ 1.32
CDH5-204ENST00000563425 ZSCAN23Q3MJ62 389 aa23.29■■□□□ 1.32
CDH5-204ENST00000563425 RIC1Q4ADV7 1423 aa23.28■■□□□ 1.32
CDH5-204ENST00000563425 AKAP11Q9UKA4 1901 aa23.28■■□□□ 1.32
CDH5-204ENST00000563425 GJB2P29033 226 aa23.28■■□□□ 1.32
CDH5-204ENST00000563425 CTSWP56202 376 aa23.28■■□□□ 1.32
CDH5-204ENST00000563425 DZIP3Q86Y13 1208 aaKnown RBP23.28■■□□□ 1.32
CDH5-204ENST00000563425 CCDC158Q5M9N0 1113 aa23.27■■□□□ 1.32
CDH5-204ENST00000563425 XAGE2Q96GT9 111 aa23.27■■□□□ 1.32
CDH5-204ENST00000563425 ADORA1P30542 326 aa23.27■■□□□ 1.32
CDH5-204ENST00000563425 TOB2Q14106 344 aaPredicted RBP23.27■■□□□ 1.32
CDH5-204ENST00000563425 MYH14Q7Z406 1995 aaKnown RBP23.26■■□□□ 1.31
CDH5-204ENST00000563425 IRS4O14654 1257 aaPredicted RBP23.26■■□□□ 1.31
CDH5-204ENST00000563425 RNF113AO15541 343 aaKnown RBP23.26■■□□□ 1.31
CDH5-204ENST00000563425 CYP21A2P08686 494 aa23.26■■□□□ 1.31
CDH5-204ENST00000563425 ZNF34Q8IZ26 560 aa23.26■■□□□ 1.31
CDH5-204ENST00000563425 TRMT112Q9UI30 125 aaKnown RBP23.26■■□□□ 1.31
CDH5-204ENST00000563425 RIPOR2Q9Y4F9 1068 aa23.26■■□□□ 1.31
CDH5-204ENST00000563425 SPATA31A5Q5VU36 1347 aa23.26■■□□□ 1.31
CDH5-204ENST00000563425 SPATA31A7Q8IWB4 1347 aa23.26■■□□□ 1.31
CDH5-204ENST00000563425 ITGA6P23229 1130 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 GORABQ5T7V8 394 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 NECAB1Q8N987 351 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 TCEANC2Q96MN5 208 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 NEK1Q96PY6 1258 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 DSCC1Q9BVC3 393 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 GREM2Q9H772 168 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 NSFL1CQ9UNZ2 370 aaKnown RBP23.25■■□□□ 1.31
CDH5-204ENST00000563425 TBC1D2BQ9UPU7 963 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 ABCC12Q96J65 1359 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 F13A1P00488 732 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
CDH5-204ENST00000563425 TTC39AQ5SRH9 613 aa23.25■■□□□ 1.31
CDH5-204ENST00000563425 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
CDH5-204ENST00000563425 ANKRD18BA2A2Z9 1011 aa23.24■■□□□ 1.31
CDH5-204ENST00000563425 SLFNL1Q499Z3 407 aa23.24■■□□□ 1.31
CDH5-204ENST00000563425 TMEM87AQ8NBN3 555 aa23.24■■□□□ 1.31
CDH5-204ENST00000563425 RBM27Q9P2N5 1060 aaKnown RBP23.24■■□□□ 1.31
CDH5-204ENST00000563425 UBN2Q6ZU65 1347 aa23.24■■□□□ 1.31
CDH5-204ENST00000563425 SLIT2O94813 1529 aa23.24■■□□□ 1.31
CDH5-204ENST00000563425 PDE8AO60658 829 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 INTS5Q6P9B9 1019 aaKnown RBP23.23■■□□□ 1.31
CDH5-204ENST00000563425 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 TMEM63CQ9P1W3 806 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 MAST3O60307 1309 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 LRP5O75197 1615 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 FOXD4L6Q3SYB3 417 aaPredicted RBP23.23■■□□□ 1.31
CDH5-204ENST00000563425 FOXD4L3Q6VB84 417 aaPredicted RBP23.23■■□□□ 1.31
CDH5-204ENST00000563425 CCDC87Q9NVE4 849 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 ATP6V1DQ9Y5K8 247 aa23.23■■□□□ 1.31
CDH5-204ENST00000563425 ARAP2Q8WZ64 1704 aa23.22■■□□□ 1.31
CDH5-204ENST00000563425 FKBP4Q02790 459 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDH5-204ENST00000563425 ATP2B3Q16720 1220 aa23.22■■□□□ 1.31
CDH5-204ENST00000563425 LRRFIP1Q32MZ4 808 aaKnown RBP23.22■■□□□ 1.31
CDH5-204ENST00000563425 METTL24Q5JXM2 366 aa23.22■■□□□ 1.31
CDH5-204ENST00000563425 USP48Q86UV5 1035 aa23.22■■□□□ 1.31
CDH5-204ENST00000563425 MTMR6Q9Y217 621 aa23.22■■□□□ 1.31
CDH5-204ENST00000563425 PDIA4P13667 645 aaKnown RBP23.21■■□□□ 1.31
CDH5-204ENST00000563425 BARGINQ6ZT62 677 aa23.21■■□□□ 1.31
CDH5-204ENST00000563425 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
CDH5-204ENST00000563425 COL5A3P25940 1745 aaPredicted RBP23.21■■□□□ 1.31
CDH5-204ENST00000563425 DDX60Q8IY21 1712 aaKnown RBP23.21■■□□□ 1.31
CDH5-204ENST00000563425 MYO5AQ9Y4I1 1855 aaKnown RBP23.21■■□□□ 1.31
CDH5-204ENST00000563425 AK7Q96M32 723 aa23.21■■□□□ 1.31
CDH5-204ENST00000563425 LAMB2P55268 1798 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 NUTM2BA6NNL0 878 aaPredicted RBP23.2■■□□□ 1.3
CDH5-204ENST00000563425 NUTM2EB1AL46 878 aaPredicted RBP23.2■■□□□ 1.3
CDH5-204ENST00000563425 HSPD1P10809 573 aaKnown RBP23.2■■□□□ 1.3
CDH5-204ENST00000563425 ATP6V1AP38606 617 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
CDH5-204ENST00000563425 NUTM2AQ8IVF1 878 aaPredicted RBP23.2■■□□□ 1.3
CDH5-204ENST00000563425 VGLL2Q8N8G2 317 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 GDPD2Q9HCC8 539 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 LOC102724428A0A0B4J2F2 783 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 ZFYP08048 801 aaPredicted RBP23.2■■□□□ 1.3
CDH5-204ENST00000563425 SIK1P57059 783 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 SCARF1Q14162 830 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 STOX1Q6ZVD7 989 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 CNNM1Q9NRU3 951 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 CNPY2Q9Y2B0 182 aa23.2■■□□□ 1.3
CDH5-204ENST00000563425 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
CDH5-204ENST00000563425 M0R2C6 588 aa23.19■■□□□ 1.3
CDH5-204ENST00000563425 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
CDH5-204ENST00000563425 RTN4Q9NQC3 1192 aaKnown RBP23.19■■□□□ 1.3
CDH5-204ENST00000563425 A0A0G2JS52 829 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms