RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 PI4KAP2A4QPH2 592 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 PI4KAP1Q8N8J0 262 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 CAMSAP2Q08AD1 1489 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 SLC4A8Q2Y0W8 1093 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 FBF1Q8TES7 1133 aa11.65□□□□□ -0.55
GTF3C1-202ENST00000561623 IL16Q14005 1332 aa11.65□□□□□ -0.55
GTF3C1-202ENST00000561623 HOOK3Q86VS8 718 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 ERO1AQ96HE7 468 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 STX17P56962 302 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 RFC4P35249 363 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 SELENOSQ9BQE4 189 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 MMRN2Q9H8L6 949 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 CPA1P15085 419 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 UBA7P41226 1012 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 CCDC6Q16204 474 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 KIF20AO95235 890 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 C8orf58Q8NAV2 365 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 TCP11L1Q9NUJ3 509 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 SLC52A1Q9NWF4 448 aa11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 DBF4Q9UBU7 674 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-202ENST00000561623 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 PLEKHM2Q8IWE5 1019 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 CCDC114Q96M63 670 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 RAB34Q9BZG1 259 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 NMIQ13287 307 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 CHST3Q7LGC8 479 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 HDXQ7Z353 690 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 IFT81Q8WYA0 676 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 A0A1W2PRG0 241 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 SMIM23A6NLE4 172 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 EXOC1Q9NV70 894 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 EXOC5O00471 708 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 SPTLC2O15270 562 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 TUBB4AP04350 444 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 DHX58Q96C10 678 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 CTNNA2P26232 953 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 TERF1P54274 439 aa11.63□□□□□ -0.55
GTF3C1-202ENST00000561623 DTNBO60941 627 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 NEBLO76041 1014 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 AMPD3Q01432 767 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 FAM76AQ8TAV0 307 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 RNF41Q9H4P4 317 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 VAT1LQ9HCJ6 419 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 SCAF11Q99590 1463 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 C6orf229H3BNL8 230 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 PRC1O43663 620 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 KIF4AO95239 1232 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 NSRP1Q9H0G5 558 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 TACC1O75410 805 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 BAG6P46379 1132 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 CRACR2BQ8N4Y2 399 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 TRMT1LQ7Z2T5 733 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-202ENST00000561623 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 CCDC129Q6ZRS4 1044 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 MFSD6Q6ZSS7 791 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 DESP17661 470 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 STAT6P42226 847 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 ARID5AQ03989 594 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 C6orf163Q5TEZ5 329 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 RMND1Q9NWS8 449 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 APOBRQ0VD83 1088 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 NAA25Q14CX7 972 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 ZNF652Q9Y2D9 606 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 STAMBPO95630 424 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 ZNF444Q8N0Y2 327 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 PPARDQ03181 441 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 ANKS4BQ8N8V4 417 aa11.61□□□□□ -0.55
GTF3C1-202ENST00000561623 A0A1B0GVL5 298 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 CPLX4Q7Z7G2 160 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 CARD6Q9BX69 1037 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 SLC5A1P13866 664 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 INTS4Q96HW7 963 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms