RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CELF1Q92879 486 aaKnown RBP14.43□□□□□ -0.1
HERC1-214ENST00000561400 SECISBP2LQ93073 1101 aaKnown RBP14.43□□□□□ -0.1
HERC1-214ENST00000561400 PA2G4Q9UQ80 394 aaKnown RBP14.43□□□□□ -0.1
HERC1-214ENST00000561400 LRP5O75197 1615 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 ANKRD18BA2A2Z9 1011 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 TGFB2P61812 414 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 MASTLQ96GX5 879 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 FHDC1Q9C0D6 1143 aaPredicted RBP14.42□□□□□ -0.1
HERC1-214ENST00000561400 SLX4Q8IY92 1834 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 NLGN2Q8NFZ4 835 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 ZNF622Q969S3 477 aaKnown RBP eCLIP14.42□□□□□ -0.14e-8■□□□□ 9.4
HERC1-214ENST00000561400 RBM17Q96I25 401 aaKnown RBP14.42□□□□□ -0.1
HERC1-214ENST00000561400 PDZRN3Q9UPQ7 1066 aa14.42□□□□□ -0.1
HERC1-214ENST00000561400 IGHDP01880 384 aa14.41□□□□□ -0.1
HERC1-214ENST00000561400 CRAMP1Q96RY5 1269 aa14.41□□□□□ -0.1
HERC1-214ENST00000561400 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
HERC1-214ENST00000561400 GRAPQ13588 217 aa14.41□□□□□ -0.1
HERC1-214ENST00000561400 STYK1Q6J9G0 422 aa14.41□□□□□ -0.1
HERC1-214ENST00000561400 SLC51AQ86UW1 340 aa14.41□□□□□ -0.1
HERC1-214ENST00000561400 GRAPLQ8TC17 118 aaPredicted RBP14.41□□□□□ -0.1
HERC1-214ENST00000561400 CDC5LQ99459 802 aaKnown RBP14.41□□□□□ -0.1
HERC1-214ENST00000561400 PUS3Q9BZE2 481 aaKnown RBP14.41□□□□□ -0.1
HERC1-214ENST00000561400 COPRSQ9NQ92 184 aa14.41□□□□□ -0.1
HERC1-214ENST00000561400 HMMRO75330 724 aa14.4□□□□□ -0.1
HERC1-214ENST00000561400 HDAC1Q13547 482 aaPredicted RBP14.4□□□□□ -0.1
HERC1-214ENST00000561400 SIL1Q9H173 461 aa14.4□□□□□ -0.1
HERC1-214ENST00000561400 ANKRD18AQ8IVF6 992 aa14.39□□□□□ -0.11
HERC1-214ENST00000561400 ALDH1B1P30837 517 aa14.39□□□□□ -0.11
HERC1-214ENST00000561400 LRRC24Q50LG9 513 aa14.39□□□□□ -0.11
HERC1-214ENST00000561400 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
HERC1-214ENST00000561400 SYT17Q9BSW7 474 aa14.39□□□□□ -0.11
HERC1-214ENST00000561400 SURF6O75683 361 aaKnown RBP14.38□□□□□ -0.11
HERC1-214ENST00000561400 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
HERC1-214ENST00000561400 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 EXOC6BQ9Y2D4 811 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 A0A1B0GUL6 1792 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
HERC1-214ENST00000561400 ATG9AQ7Z3C6 839 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 CNKSR1Q969H4 720 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 MPHOSPH8Q99549 860 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
HERC1-214ENST00000561400 BSDC1Q9NW68 430 aaPredicted RBP14.38□□□□□ -0.11
HERC1-214ENST00000561400 RIPOR2Q9Y4F9 1068 aa14.38□□□□□ -0.11
HERC1-214ENST00000561400 EYA2O00167 538 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 BBOX1O75936 387 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
HERC1-214ENST00000561400 RGS3P49796 1198 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 DCTPP1Q9H773 170 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 PPP4R2Q9NY27 417 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 PIM2Q9P1W9 311 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 TTLL6Q8N841 843 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 CNNM1Q9NRU3 951 aa14.37□□□□□ -0.11
HERC1-214ENST00000561400 OLFM4Q6UX06 510 aa14.36□□□□□ -0.11
HERC1-214ENST00000561400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
HERC1-214ENST00000561400 PPEF1O14829 653 aaPredicted RBP14.35□□□□□ -0.11
HERC1-214ENST00000561400 CIAO1O76071 339 aa14.35□□□□□ -0.11
HERC1-214ENST00000561400 SASH1O94885 1247 aa14.35□□□□□ -0.11
HERC1-214ENST00000561400 C7orf43Q8WVR3 580 aa14.35□□□□□ -0.11
HERC1-214ENST00000561400 MINPP1Q9UNW1 487 aa14.35□□□□□ -0.11
HERC1-214ENST00000561400 UTRNP46939 3433 aa14.35□□□□□ -0.11
HERC1-214ENST00000561400 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
HERC1-214ENST00000561400 APBB1O00213 710 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 IL15P40933 162 aaPredicted RBP14.34□□□□□ -0.11
HERC1-214ENST00000561400 SMC5Q8IY18 1101 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 HELBQ8NG08 1087 aaPredicted RBP14.34□□□□□ -0.11
HERC1-214ENST00000561400 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
HERC1-214ENST00000561400 ATP6V0A2Q9Y487 856 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 ARFGEF1Q9Y6D6 1849 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 CHRNDQ07001 517 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 SP8Q8IXZ3 490 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
HERC1-214ENST00000561400 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
HERC1-214ENST00000561400 LTBP1Q14766 1721 aa14.33□□□□□ -0.11
HERC1-214ENST00000561400 WTIPA6NIX2 430 aaPredicted RBP14.33□□□□□ -0.12
HERC1-214ENST00000561400 C21orf2O43822 256 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
HERC1-214ENST00000561400 DALRD3Q5D0E6 543 aaKnown RBP14.33□□□□□ -0.12
HERC1-214ENST00000561400 TMC4Q7Z404 712 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 VGLL2Q8N8G2 317 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 TAF5LO75529 589 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 TFCP2Q12800 502 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 METTL24Q5JXM2 366 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 GCC1Q96CN9 775 aa14.33□□□□□ -0.12
HERC1-214ENST00000561400 SNAP23O00161 211 aa14.32□□□□□ -0.12
HERC1-214ENST00000561400 HSP90AB4PQ58FF6 505 aa14.32□□□□□ -0.12
HERC1-214ENST00000561400 MROH5Q6ZUA9 1318 aa14.32□□□□□ -0.12
HERC1-214ENST00000561400 RHPN1Q8TCX5 695 aa14.32□□□□□ -0.12
HERC1-214ENST00000561400 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
HERC1-214ENST00000561400 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
HERC1-214ENST00000561400 RAB11FIP3O75154 756 aa14.31□□□□□ -0.12
HERC1-214ENST00000561400 PDE8BO95263 885 aa14.31□□□□□ -0.12
HERC1-214ENST00000561400 GPSM2P81274 684 aa14.31□□□□□ -0.12
HERC1-214ENST00000561400 CEP126Q9P2H0 1117 aa14.31□□□□□ -0.12
HERC1-214ENST00000561400 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
HERC1-214ENST00000561400 ERC1Q8IUD2 1116 aa14.31□□□□□ -0.12
HERC1-214ENST00000561400 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
HERC1-214ENST00000561400 IL1RAPL2Q9NP60 686 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms