RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MAP7D1Q3KQU3 841 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 TRIM50Q86XT4 487 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 PANK1Q8TE04 598 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 CLP1Q92989 425 aaKnown RBP7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 RUNDC1Q96C34 613 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 GTPBP4Q9BZE4 634 aaKnown RBP7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 ZKSCAN5Q9Y2L8 839 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 ATP10BO94823 1461 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 ERVK-7P63135 1459 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 UQCRHLA0A096LP55 91 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 PTPRTO14522 1441 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 PRMT3O60678 531 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 KIF20AO95235 890 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 ZIC2O95409 532 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 ABL1P00519 1130 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 ITGB2P05107 769 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 UQCRHP07919 91 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 NUCB2P80303 420 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 PSME1Q06323 249 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 DMTNQ08495 405 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 FAM69CQ0P6D2 419 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 AGERQ15109 404 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 TSGA10IPQ3SY00 556 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 LINC01559Q495D7 138 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 PHTF2Q8N3S3 785 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 OCSTAMPQ9BR26 566 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 CCDC94Q9BW85 323 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 ZFAND3Q9H8U3 227 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 CCDC39Q9UFE4 941 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 DDX19BQ9UMR2 479 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 DOLKQ9UPQ8 538 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 SYCP2Q9BX26 1530 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 ABCC11Q96J66 1382 aa7.31□□□□□ -1.24
SNRPA1-209ENST00000560307 MED14O60244 1454 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 ZNF518AQ6AHZ1 1483 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 SOWAHDA6NJG2 315 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 IGSF3O75054 1194 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 TNNT2P45379 298 aaPredicted RBP7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 CLDN10P78369 228 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 RBM10P98175 930 aaKnown RBP7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 BMP2KLQ5H9B9 411 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 TAF3Q5VWG9 929 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 ZKSCAN2Q63HK3 967 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 PRIMPOLQ96LW4 560 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 CHMP4BQ9H444 224 aaKnown RBP7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 NSD2O96028 1365 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 ERCC6Q03468 1493 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 ANKRD26Q9UPS8 1709 aa7.3□□□□□ -1.24
SNRPA1-209ENST00000560307 CDC14CA4D256 554 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 PLEKHD1A6NEE1 506 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 UNCXA6NJT0 531 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 LETM1O95202 739 aaPredicted RBP7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 GTF2F1P35269 517 aaKnown RBP eCLIP7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 HMGN5P82970 282 aaKnown RBP7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 SWI5Q1ZZU3 235 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 DZIP1LQ8IYY4 767 aaKnown RBP7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 UNC93B1Q9H1C4 597 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 VWDEQ8N2E2 1590 aa7.29□□□□□ -1.24
SNRPA1-209ENST00000560307 IL16Q14005 1332 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 TRAPPC8Q9Y2L5 1435 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 LGR5O75473 907 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 BAG4O95429 457 aaKnown RBP7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 CYP2E1P05181 493 aaPredicted RBP7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 GTF2IP78347 998 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 PTSQ03393 145 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 CCDC146Q8IYE0 955 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 MYRIPQ8NFW9 859 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 CWC22Q9HCG8 908 aaKnown RBP7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 R3HCC1Q9Y3T6 440 aaKnown RBP7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 DDX49Q9Y6V7 483 aaKnown RBP7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 KIF1BO60333 1816 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 NRXN1Q9ULB1 1477 aa7.28□□□□□ -1.24
SNRPA1-209ENST00000560307 SOS2Q07890 1332 aaPredicted RBP7.27□□□□□ -1.24
SNRPA1-209ENST00000560307 CNTNAP5Q8WYK1 1306 aa7.27□□□□□ -1.24
SNRPA1-209ENST00000560307 NOS1P29475 1434 aa7.27□□□□□ -1.24
SNRPA1-209ENST00000560307 RBM47A0AV96 593 aaKnown RBP7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 GIGYF1O75420 1035 aaPredicted RBP7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 FURINP09958 794 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 RLBP1P12271 317 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 BAG6P46379 1132 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 SEC13P55735 322 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 NUCB1Q02818 461 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 LARGE2Q8N3Y3 721 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 TPCN2Q8NHX9 752 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 NANOS1Q8WY41 292 aaKnown RBP7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 HINFPQ9BQA5 517 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 KLF16Q9BXK1 252 aaPredicted RBP7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 BCL2L13Q9BXK5 485 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 ANO2Q9NQ90 1003 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 ENAMQ9NRM1 1142 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 KIAA1024Q9UPX6 916 aa7.27□□□□□ -1.25
SNRPA1-209ENST00000560307 QRICH2Q9H0J4 1663 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms