RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 TRIP4Q15650 581 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-218ENST00000560236 PRR23CQ6ZRP0 262 aa7.41□□□□□ -1.22
LRRC28-218ENST00000560236 MAP4K3Q8IVH8 894 aa7.41□□□□□ -1.22
LRRC28-218ENST00000560236 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
LRRC28-218ENST00000560236 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
LRRC28-218ENST00000560236 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
LRRC28-218ENST00000560236 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
LRRC28-218ENST00000560236 ALX3O95076 343 aa7.4□□□□□ -1.22
LRRC28-218ENST00000560236 DZIP1LQ8IYY4 767 aaKnown RBP7.4□□□□□ -1.22
LRRC28-218ENST00000560236 TMEM130Q8N3G9 435 aa7.4□□□□□ -1.22
LRRC28-218ENST00000560236 MKNK1Q9BUB5 465 aa7.4□□□□□ -1.22
LRRC28-218ENST00000560236 FAM13BQ9NYF5 915 aa7.4□□□□□ -1.22
LRRC28-218ENST00000560236 TRIM33Q9UPN9 1127 aa7.4□□□□□ -1.22
LRRC28-218ENST00000560236 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-218ENST00000560236 SETDB1Q15047 1291 aa7.39□□□□□ -1.23
LRRC28-218ENST00000560236 FAM26DQ5JW98 314 aa7.39□□□□□ -1.23
LRRC28-218ENST00000560236 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
LRRC28-218ENST00000560236 MUC3BQ9H195 1237 aa7.39□□□□□ -1.23
LRRC28-218ENST00000560236 RNF112Q9ULX5 631 aa7.39□□□□□ -1.23
LRRC28-218ENST00000560236 TNFRSF10BO14763 440 aa7.38□□□□□ -1.23
LRRC28-218ENST00000560236 PTCD1O75127 700 aaKnown RBP7.38□□□□□ -1.23
LRRC28-218ENST00000560236 NAA30Q147X3 362 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-218ENST00000560236 CAPN12Q6ZSI9 719 aa7.38□□□□□ -1.23
LRRC28-218ENST00000560236 OR13H1Q8NG92 308 aa7.38□□□□□ -1.23
LRRC28-218ENST00000560236 CXXC1Q9P0U4 656 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-218ENST00000560236 FNDC3AQ9Y2H6 1198 aaKnown RBP7.38□□□□□ -1.23
LRRC28-218ENST00000560236 PPME1Q9Y570 386 aa7.38□□□□□ -1.23
LRRC28-218ENST00000560236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-218ENST00000560236 HYAL2Q12891 473 aa7.37□□□□□ -1.23
LRRC28-218ENST00000560236 TTC39BQ5VTQ0 682 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-218ENST00000560236 SPACA7Q96KW9 195 aa7.37□□□□□ -1.23
LRRC28-218ENST00000560236 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
LRRC28-218ENST00000560236 GLB1P16278 677 aa7.36□□□□□ -1.23
LRRC28-218ENST00000560236 SCNN1AP37088 669 aa7.36□□□□□ -1.23
LRRC28-218ENST00000560236 ZAP70P43403 619 aa7.36□□□□□ -1.23
LRRC28-218ENST00000560236 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-218ENST00000560236 SLC51AQ86UW1 340 aa7.36□□□□□ -1.23
LRRC28-218ENST00000560236 AGGF1Q8N302 714 aaeCLIP7.36□□□□□ -1.23
LRRC28-218ENST00000560236 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-218ENST00000560236 LINC01387J3KSC0 135 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 SMNDC1O75940 238 aaKnown RBP eCLIP7.35□□□□□ -1.23
LRRC28-218ENST00000560236 ATG7O95352 703 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 FSTP19883 344 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
LRRC28-218ENST00000560236 ATP11AP98196 1134 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 CEP135Q66GS9 1140 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 Q6ZS46 218 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 GPR152Q8TDT2 470 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 LACRTQ9GZZ8 138 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 STIM2Q9P246 746 aa7.35□□□□□ -1.23
LRRC28-218ENST00000560236 TMEM164Q5U3C3 297 aa7.34□□□□□ -1.23
LRRC28-218ENST00000560236 ZBTB39O15060 712 aa7.33□□□□□ -1.24
LRRC28-218ENST00000560236 CDC27P30260 824 aa7.33□□□□□ -1.24
LRRC28-218ENST00000560236 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-218ENST00000560236 TXNDC11Q6PKC3 985 aa7.33□□□□□ -1.24
LRRC28-218ENST00000560236 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.33□□□□□ -1.24
LRRC28-218ENST00000560236 ABTB2Q8N961 1025 aa7.33□□□□□ -1.24
LRRC28-218ENST00000560236 GALNT11Q8NCW6 608 aa7.33□□□□□ -1.24
LRRC28-218ENST00000560236 ABI2Q9NYB9 513 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-218ENST00000560236 KRTAP9-6A0A140TA67 174 aa7.32□□□□□ -1.24
LRRC28-218ENST00000560236 CDC25BP30305 580 aa7.32□□□□□ -1.24
LRRC28-218ENST00000560236 CLP1Q92989 425 aaKnown RBP7.32□□□□□ -1.24
LRRC28-218ENST00000560236 RASSF4Q9H2L5 321 aa7.32□□□□□ -1.24
LRRC28-218ENST00000560236 PCMTD2Q9NV79 361 aa7.32□□□□□ -1.24
LRRC28-218ENST00000560236 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
LRRC28-218ENST00000560236 FAM117BQ6P1L5 589 aa7.31□□□□□ -1.24
LRRC28-218ENST00000560236 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
LRRC28-218ENST00000560236 NCAPG2Q86XI2 1143 aa7.31□□□□□ -1.24
LRRC28-218ENST00000560236 UBL7Q96S82 380 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-218ENST00000560236 STOML1Q9UBI4 398 aa7.31□□□□□ -1.24
LRRC28-218ENST00000560236 FAM177BA6PVY3 158 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 KIF4AO95239 1232 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 WISP1O95388 367 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 CYP2E1P05181 493 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-218ENST00000560236 SSTR4P31391 388 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 CARD10Q9BWT7 1032 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 PBX4Q9BYU1 374 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 CEP41Q9BYV8 373 aa7.3□□□□□ -1.24
LRRC28-218ENST00000560236 FSCN2O14926 492 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 GSC2O15499 205 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 DHX15O43143 795 aaKnown RBP7.29□□□□□ -1.24
LRRC28-218ENST00000560236 PTPRAP18433 802 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 PDE12Q6L8Q7 609 aaKnown RBP7.29□□□□□ -1.24
LRRC28-218ENST00000560236 CEP120Q8N960 986 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 KLHL23Q8NBE8 558 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 ELP3Q9H9T3 547 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 SH2B1Q9NRF2 756 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-218ENST00000560236 KCNK4Q9NYG8 393 aa7.29□□□□□ -1.24
LRRC28-218ENST00000560236 EPHA1P21709 976 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 ATP2B4P23634 1241 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 ADAMTSL4Q6UY14 1074 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 ZNF438Q7Z4V0 828 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 PBXIP1Q96AQ6 731 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 NUDT16Q96DE0 195 aaKnown RBP7.28□□□□□ -1.24
LRRC28-218ENST00000560236 TMEM63CQ9P1W3 806 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 SEPT3Q9UH03 358 aa7.28□□□□□ -1.24
LRRC28-218ENST00000560236 IGLV1-40P01703 118 aa7.27□□□□□ -1.25
LRRC28-218ENST00000560236 CD97P48960 835 aa7.27□□□□□ -1.25
LRRC28-218ENST00000560236 DUOXA2Q1HG44 320 aa7.27□□□□□ -1.25
LRRC28-218ENST00000560236 KIAA1211Q6ZU35 1233 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms