RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 INF2Q27J81 1249 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 KRBA2Q6ZNG9 492 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 ADAMTS8Q9UP79 889 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 TNNC1P63316 161 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 CCDC38Q502W7 563 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 PSMD6Q15008 389 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 IFT81Q8WYA0 676 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 GBP5Q96PP8 586 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 ZNF131P52739 623 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 NAA16Q6N069 864 aaPredicted RBP15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 RAB11FIP4Q86YS3 637 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 TXNDC9O14530 226 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 DNAI1Q9UI46 699 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 WDR46O15213 610 aaKnown RBP15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 SLC5A1P13866 664 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 SEL1L2Q5TEA6 688 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 HAUS2Q9NVX0 235 aa15.66■□□□□ 0.1
CSPG4P12-202ENST00000559989 E7EVH7 732 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 EIF2AQ9BY44 585 aaKnown RBP15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 ZSCAN16Q9H4T2 348 aaPredicted RBP15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 UAP1Q16222 522 aaPredicted RBP15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 STARD3NLO95772 234 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 TAOK1Q7L7X3 1001 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 AFAP1L1Q8TED9 768 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 ZC4H2Q9NQZ6 224 aa15.65■□□□□ 0.1
CSPG4P12-202ENST00000559989 BMP15O95972 392 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 CCDC94Q9BW85 323 aaPredicted RBP15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 KAT14Q9H8E8 782 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 AGTPBP1Q9UPW5 1226 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 SPAG1Q07617 926 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 MAP3K21Q5TCX8 1036 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 SYKP43405 635 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 SMIM24O75264 130 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 FAM160A1Q05DH4 1040 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 RRAGBQ5VZM2 374 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
CSPG4P12-202ENST00000559989 RPAP2Q8IXW5 612 aaPredicted RBP15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 UTP11Q9Y3A2 253 aaKnown RBP15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 STK10O94804 968 aaKnown RBP15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 PDE4BQ07343 736 aa15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 CAPZA3Q96KX2 299 aa15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 GJB2P29033 226 aa15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 TAF12Q16514 161 aa15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 PTGS1P23219 599 aa15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 SMARCC2Q8TAQ2 1214 aa15.63■□□□□ 0.09
CSPG4P12-202ENST00000559989 PDCD2Q16342 344 aaPredicted RBP15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 TOM1L2Q6ZVM7 507 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 NUTM1Q86Y26 1132 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 TLDC2A0PJX2 215 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 RASSF2P50749 326 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 NEK11Q8NG66 645 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 RASA3Q14644 834 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 TMEM67Q5HYA8 995 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 XAB2Q9HCS7 855 aaKnown RBP15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 IL1RAPL2Q9NP60 686 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 I3L4J1 428 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 TRAF1Q13077 416 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 MX1P20591 662 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 INPP5BP32019 993 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 ARHGAP25P42331 645 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 CCT2P78371 535 aaKnown RBP15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 DDX54Q8TDD1 881 aaKnown RBP15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 SKILP12757 684 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 Q9H521 79 aa15.62■□□□□ 0.09
CSPG4P12-202ENST00000559989 PSMA7O14818 248 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 BICDL1Q6ZP65 573 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 KIFC2Q96AC6 838 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 OGFRQ9NZT2 677 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 FAN1Q9Y2M0 1017 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 IARSP41252 1262 aaKnown RBP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 PPANQ9NQ55 473 aaKnown RBP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 CUX1P39880 1505 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 NOLC1Q14978 699 aaKnown RBP eCLIP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 CXorf38Q8TB03 319 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 ZPR1O75312 459 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 DPH6Q7L8W6 267 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 PLCB1Q9NQ66 1216 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 NOC2LQ9Y3T9 749 aaKnown RBP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 RILPL1Q5EBL4 403 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 METAP2P50579 478 aaKnown RBP eCLIP15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 FAM204AQ9H8W3 233 aa15.61■□□□□ 0.09
CSPG4P12-202ENST00000559989 KRT3P12035 628 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 CROCCP2Q86T23 111 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 SYT1P21579 422 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms