RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 KLRG1Q96E93 195 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
SMAD3-208ENST00000558827 GGA1Q9UJY5 639 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 CACNA1FO60840 1977 aa15.93■□□□□ 0.14
SMAD3-208ENST00000558827 SPEF2Q9C093 1822 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 LRRC37AA6NMS7 1700 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 PSMD14O00487 310 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 ITGBL1O95965 494 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-208ENST00000558827 TNIP1Q15025 636 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-208ENST00000558827 MIER1Q8N108 512 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 CDC5LQ99459 802 aaKnown RBP15.92■□□□□ 0.14
SMAD3-208ENST00000558827 EYA3Q99504 573 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 GPRC5DQ9NZD1 345 aa15.92■□□□□ 0.14
SMAD3-208ENST00000558827 MKRN1Q9UHC7 482 aaKnown RBP15.92■□□□□ 0.14
SMAD3-208ENST00000558827 E9PSI1 815 aa15.91■□□□□ 0.14
SMAD3-208ENST00000558827 CCER2I3L3R5 266 aa15.91■□□□□ 0.14
SMAD3-208ENST00000558827 ITGA6P23229 1130 aa15.91■□□□□ 0.14
SMAD3-208ENST00000558827 EPHA10Q5JZY3 1008 aa15.91■□□□□ 0.14
SMAD3-208ENST00000558827 RBM26Q5T8P6 1007 aaKnown RBP15.91■□□□□ 0.14
SMAD3-208ENST00000558827 MRPL50Q8N5N7 158 aaKnown RBP15.91■□□□□ 0.14
SMAD3-208ENST00000558827 CNOT7Q9UIV1 285 aaKnown RBP15.91■□□□□ 0.14
SMAD3-208ENST00000558827 MINPP1Q9UNW1 487 aa15.91■□□□□ 0.14
SMAD3-208ENST00000558827 MYH3P11055 1940 aa15.9■□□□□ 0.14
SMAD3-208ENST00000558827 TRAF5O00463 557 aa15.9■□□□□ 0.14
SMAD3-208ENST00000558827 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
SMAD3-208ENST00000558827 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
SMAD3-208ENST00000558827 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
SMAD3-208ENST00000558827 SAMD7Q7Z3H4 446 aa15.89■□□□□ 0.13
SMAD3-208ENST00000558827 HELBQ8NG08 1087 aaPredicted RBP15.89■□□□□ 0.13
SMAD3-208ENST00000558827 ADARB2Q9NS39 739 aaKnown RBP15.89■□□□□ 0.13
SMAD3-208ENST00000558827 PODXL2Q9NZ53 605 aa15.89■□□□□ 0.13
SMAD3-208ENST00000558827 C9orf78Q9NZ63 289 aaPredicted RBP15.89■□□□□ 0.13
SMAD3-208ENST00000558827 XDHP47989 1333 aa15.89■□□□□ 0.13
SMAD3-208ENST00000558827 PASKQ96RG2 1323 aa15.89■□□□□ 0.13
SMAD3-208ENST00000558827 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 SNAP23O00161 211 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 CSF1RP07333 972 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 ATP2B4P23634 1241 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 HIRAP54198 1017 aaPredicted RBP15.88■□□□□ 0.13
SMAD3-208ENST00000558827 FOXO4P98177 505 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
SMAD3-208ENST00000558827 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
SMAD3-208ENST00000558827 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 DLK2Q6UY11 383 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 MICALL2Q8IY33 904 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 FBXW7Q969H0 707 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 ZNF594Q96JF6 807 aaPredicted RBP15.88■□□□□ 0.13
SMAD3-208ENST00000558827 MPHOSPH8Q99549 860 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 PLA2G12BQ9BX93 195 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 SRCIN1Q9C0H9 1055 aa15.88■□□□□ 0.13
SMAD3-208ENST00000558827 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
SMAD3-208ENST00000558827 H7C1D1 291 aa15.87■□□□□ 0.13
SMAD3-208ENST00000558827 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
SMAD3-208ENST00000558827 SCN9AQ15858 1988 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 ANKRD18BA2A2Z9 1011 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 TMEM88BA6NKF7 163 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 GRM8O00222 908 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 PLIN1O60240 522 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 TAF5LO75529 589 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 EGFRP00533 1210 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 KLRK1P26718 216 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 CCT4P50991 539 aaKnown RBP15.86■□□□□ 0.13
SMAD3-208ENST00000558827 TXNRD3Q86VQ6 643 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 SUCLG2Q96I99 432 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 GLIS2Q9BZE0 524 aaPredicted RBP15.86■□□□□ 0.13
SMAD3-208ENST00000558827 CREBZFQ9NS37 354 aa15.86■□□□□ 0.13
SMAD3-208ENST00000558827 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-208ENST00000558827 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
SMAD3-208ENST00000558827 ABT1Q9ULW3 272 aaKnown RBP15.85■□□□□ 0.13
SMAD3-208ENST00000558827 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
SMAD3-208ENST00000558827 CHRNDQ07001 517 aa15.84■□□□□ 0.13
SMAD3-208ENST00000558827 IFIT5Q13325 482 aaKnown RBP15.84■□□□□ 0.13
SMAD3-208ENST00000558827 TAF7LQ5H9L4 462 aa15.84■□□□□ 0.13
SMAD3-208ENST00000558827 ZNF408Q9H9D4 720 aa15.84■□□□□ 0.13
SMAD3-208ENST00000558827 VIL1P09327 827 aaKnown RBP15.83■□□□□ 0.12
SMAD3-208ENST00000558827 KCNJ4P48050 445 aa15.83■□□□□ 0.12
SMAD3-208ENST00000558827 GRM1Q13255 1194 aa15.83■□□□□ 0.12
SMAD3-208ENST00000558827 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
SMAD3-208ENST00000558827 TRMT2AQ8IZ69 625 aaKnown RBP15.83■□□□□ 0.12
SMAD3-208ENST00000558827 JMYQ8N9B5 988 aa15.83■□□□□ 0.12
SMAD3-208ENST00000558827 ZNF804BA4D1E1 1349 aa15.83■□□□□ 0.12
SMAD3-208ENST00000558827 POLR2AP24928 1970 aaKnown RBP15.82■□□□□ 0.12
SMAD3-208ENST00000558827 CCDC57Q2TAC2 916 aa15.82■□□□□ 0.12
SMAD3-208ENST00000558827 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-208ENST00000558827 KAZALD1Q96I82 304 aa15.82■□□□□ 0.12
SMAD3-208ENST00000558827 ASTN2O75129 1339 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-208ENST00000558827 VEGFBP49765 207 aa15.81■□□□□ 0.12
SMAD3-208ENST00000558827 CST9Q5W186 159 aa15.81■□□□□ 0.12
SMAD3-208ENST00000558827 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
SMAD3-208ENST00000558827 DPF2Q92785 391 aa15.81■□□□□ 0.12
SMAD3-208ENST00000558827 PUS3Q9BZE2 481 aaKnown RBP15.81■□□□□ 0.12
SMAD3-208ENST00000558827 ANKRD2Q9GZV1 360 aa15.81■□□□□ 0.12
SMAD3-208ENST00000558827 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
SMAD3-208ENST00000558827 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
SMAD3-208ENST00000558827 SCAF8Q9UPN6 1271 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms