RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PCSK2P16519 638 aa9.47□□□□□ -0.89
GPHN-215ENST00000557654 SOX18P35713 384 aa9.47□□□□□ -0.89
GPHN-215ENST00000557654 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
GPHN-215ENST00000557654 ARHGAP4P98171 946 aa9.47□□□□□ -0.89
GPHN-215ENST00000557654 PCSK7Q16549 785 aa9.47□□□□□ -0.89
GPHN-215ENST00000557654 PDE12Q6L8Q7 609 aaKnown RBP9.47□□□□□ -0.89
GPHN-215ENST00000557654 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
GPHN-215ENST00000557654 KANSL3Q9P2N6 904 aa9.47□□□□□ -0.89
GPHN-215ENST00000557654 KRBA1A5PL33 1030 aa9.46□□□□□ -0.9
GPHN-215ENST00000557654 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
GPHN-215ENST00000557654 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.9
GPHN-215ENST00000557654 GRIK5Q16478 980 aa9.45□□□□□ -0.9
GPHN-215ENST00000557654 TTC16Q8NEE8 873 aa9.45□□□□□ -0.9
GPHN-215ENST00000557654 PLD4Q96BZ4 506 aa9.45□□□□□ -0.9
GPHN-215ENST00000557654 PIK3R2O00459 728 aa9.44□□□□□ -0.9
GPHN-215ENST00000557654 GHRHP01286 108 aa9.44□□□□□ -0.9
GPHN-215ENST00000557654 ITGB2P05107 769 aa9.44□□□□□ -0.9
GPHN-215ENST00000557654 RPLP1P05386 114 aaKnown RBP9.44□□□□□ -0.9
GPHN-215ENST00000557654 ATP11AP98196 1134 aa9.44□□□□□ -0.9
GPHN-215ENST00000557654 NOP53Q9NZM5 478 aaKnown RBP9.44□□□□□ -0.9
GPHN-215ENST00000557654 FRRS1LQ9P0K9 344 aa9.44□□□□□ -0.9
GPHN-215ENST00000557654 FOXD3Q9UJU5 478 aaPredicted RBP9.44□□□□□ -0.9
GPHN-215ENST00000557654 SOWAHDA6NJG2 315 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 ACPPP15309 386 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 HYAL2Q12891 473 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 TRAPPC3LQ5T215 181 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 XKR5Q6UX68 686 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 GJD3Q8N144 294 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 CHRDQ9H2X0 955 aa9.43□□□□□ -0.9
GPHN-215ENST00000557654 GNEQ9Y223 722 aaKnown RBP9.43□□□□□ -0.9
GPHN-215ENST00000557654 TNFRSF21O75509 655 aa9.42□□□□□ -0.9
GPHN-215ENST00000557654 PLA2G4EQ3MJ16 856 aa9.42□□□□□ -0.9
GPHN-215ENST00000557654 DMRTC2Q8IXT2 367 aaPredicted RBP9.42□□□□□ -0.9
GPHN-215ENST00000557654 TRAIPQ9BWF2 469 aa9.42□□□□□ -0.9
GPHN-215ENST00000557654 BRPF3Q9ULD4 1205 aa9.42□□□□□ -0.9
GPHN-215ENST00000557654 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
GPHN-215ENST00000557654 CES1P23141 567 aa9.41□□□□□ -0.9
GPHN-215ENST00000557654 GDF6Q6KF10 455 aaPredicted RBP9.41□□□□□ -0.9
GPHN-215ENST00000557654 ADAMTSL4Q6UY14 1074 aa9.41□□□□□ -0.9
GPHN-215ENST00000557654 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
GPHN-215ENST00000557654 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
GPHN-215ENST00000557654 TRIM33Q9UPN9 1127 aa9.41□□□□□ -0.9
GPHN-215ENST00000557654 EREGO14944 169 aa9.4□□□□□ -0.9
GPHN-215ENST00000557654 TRPA1O75762 1119 aa9.4□□□□□ -0.9
GPHN-215ENST00000557654 KIF4AO95239 1232 aa9.4□□□□□ -0.9
GPHN-215ENST00000557654 USP5P45974 858 aa9.4□□□□□ -0.9
GPHN-215ENST00000557654 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
GPHN-215ENST00000557654 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
GPHN-215ENST00000557654 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 CEP120Q8N960 986 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 TTC9Q92623 222 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 RBSNQ9H1K0 784 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 SALL4Q9UJQ4 1053 aa9.39□□□□□ -0.91
GPHN-215ENST00000557654 NDUFB5O43674 189 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 PHACTR2O75167 634 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 CHRNA4P43681 627 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 BAG6P46379 1132 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 EHHADHQ08426 723 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 GRIK4Q16099 956 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 CEP135Q66GS9 1140 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 WFDC8Q8IUA0 241 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 LACRTQ9GZZ8 138 aa9.38□□□□□ -0.91
GPHN-215ENST00000557654 SPDYE3A6NKU9 549 aa9.37□□□□□ -0.91
GPHN-215ENST00000557654 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
GPHN-215ENST00000557654 SPATA31C1P0DKV0 1188 aa9.37□□□□□ -0.91
GPHN-215ENST00000557654 TRIM28Q13263 835 aaKnown RBP9.37□□□□□ -0.91
GPHN-215ENST00000557654 PRRT3Q5FWE3 981 aa9.37□□□□□ -0.91
GPHN-215ENST00000557654 SNX29Q8TEQ0 813 aa9.37□□□□□ -0.91
GPHN-215ENST00000557654 HHIPQ96QV1 700 aa9.37□□□□□ -0.91
GPHN-215ENST00000557654 C1QTNF9BB2RNN3 333 aa9.36□□□□□ -0.91
GPHN-215ENST00000557654 KCNA1Q09470 495 aa9.36□□□□□ -0.91
GPHN-215ENST00000557654 ALYREFQ86V81 257 aaKnown RBP9.36□□□□□ -0.91
GPHN-215ENST00000557654 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
GPHN-215ENST00000557654 IL22RA1Q8N6P7 574 aa9.36□□□□□ -0.91
GPHN-215ENST00000557654 GPR182O15218 404 aa9.35□□□□□ -0.91
GPHN-215ENST00000557654 FAM129BQ96TA1 746 aa9.35□□□□□ -0.91
GPHN-215ENST00000557654 PBX4Q9BYU1 374 aa9.35□□□□□ -0.91
GPHN-215ENST00000557654 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
GPHN-215ENST00000557654 CDC25BP30305 580 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 ORC1Q13415 861 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 SHISA2Q6UWI4 295 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 AEBP1Q8IUX7 1158 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 FMR1NBQ8N0W7 255 aaPredicted RBP9.34□□□□□ -0.91
GPHN-215ENST00000557654 TMC1Q8TDI8 760 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 ZFYVE28Q9HCC9 887 aa9.34□□□□□ -0.91
GPHN-215ENST00000557654 NFKBIEO00221 500 aa9.33□□□□□ -0.92
GPHN-215ENST00000557654 DEAF1O75398 565 aaPredicted RBP9.33□□□□□ -0.92
GPHN-215ENST00000557654 SMNDC1O75940 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
GPHN-215ENST00000557654 IGHA2P01877 340 aa9.33□□□□□ -0.92
GPHN-215ENST00000557654 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
GPHN-215ENST00000557654 RAC1P63000 192 aa9.33□□□□□ -0.92
GPHN-215ENST00000557654 TXNDC11Q6PKC3 985 aa9.33□□□□□ -0.92
GPHN-215ENST00000557654 POP1Q99575 1024 aaKnown RBP9.33□□□□□ -0.92
GPHN-215ENST00000557654 DZANK1Q9NVP4 752 aa9.33□□□□□ -0.92
GPHN-215ENST00000557654 PMEPA1Q969W9 287 aa9.32□□□□□ -0.92
GPHN-215ENST00000557654 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms