RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 RTL9Q8NET4 1388 aa18.27■□□□□ 0.51
ACTN1-219ENST00000556432 RASAL3Q86YV0 1011 aa18.26■□□□□ 0.51
ACTN1-219ENST00000556432 CELF1Q92879 486 aaKnown RBP18.26■□□□□ 0.51
ACTN1-219ENST00000556432 ASTN2O75129 1339 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-219ENST00000556432 REM2Q8IYK8 340 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-219ENST00000556432 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
ACTN1-219ENST00000556432 ANGEL2Q5VTE6 544 aaKnown RBP18.24■□□□□ 0.51
ACTN1-219ENST00000556432 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
ACTN1-219ENST00000556432 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
ACTN1-219ENST00000556432 PKN2Q16513 984 aaKnown RBP18.23■□□□□ 0.51
ACTN1-219ENST00000556432 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
ACTN1-219ENST00000556432 ZC3H12CQ9C0D7 883 aaKnown RBP18.23■□□□□ 0.51
ACTN1-219ENST00000556432 UFL1O94874 794 aa18.22■□□□□ 0.51
ACTN1-219ENST00000556432 RIPK4P57078 832 aa18.22■□□□□ 0.51
ACTN1-219ENST00000556432 SCARF1Q14162 830 aa18.22■□□□□ 0.51
ACTN1-219ENST00000556432 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
ACTN1-219ENST00000556432 ATP5J2-PTCD1G3V325 749 aa18.21■□□□□ 0.51
ACTN1-219ENST00000556432 TBC1D8O95759 1140 aa18.21■□□□□ 0.51
ACTN1-219ENST00000556432 VIL1P09327 827 aaKnown RBP18.21■□□□□ 0.51
ACTN1-219ENST00000556432 TTLL12Q14166 644 aaPredicted RBP18.21■□□□□ 0.51
ACTN1-219ENST00000556432 SF3B3Q15393 1217 aaKnown RBP18.21■□□□□ 0.51
ACTN1-219ENST00000556432 ZNF296Q8WUU4 475 aaPredicted RBP18.21■□□□□ 0.51
ACTN1-219ENST00000556432 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
ACTN1-219ENST00000556432 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
ACTN1-219ENST00000556432 FKBP1BP68106 108 aa18.2■□□□□ 0.5
ACTN1-219ENST00000556432 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
ACTN1-219ENST00000556432 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
ACTN1-219ENST00000556432 PAPPA2Q9BXP8 1791 aa18.19■□□□□ 0.5
ACTN1-219ENST00000556432 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
ACTN1-219ENST00000556432 RSBN1LQ6PCB5 846 aaPredicted RBP18.19■□□□□ 0.5
ACTN1-219ENST00000556432 GGA1Q9UJY5 639 aa18.19■□□□□ 0.5
ACTN1-219ENST00000556432 UBE2Q2LH0YL09 131 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
ACTN1-219ENST00000556432 ZNF280AP59817 542 aaPredicted RBP18.18■□□□□ 0.5
ACTN1-219ENST00000556432 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 ANKRD13DQ6ZTN6 518 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 MOB2Q70IA6 237 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 AGBL3Q8NEM8 1001 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 SCAF8Q9UPN6 1271 aaKnown RBP18.18■□□□□ 0.5
ACTN1-219ENST00000556432 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
ACTN1-219ENST00000556432 SCN9AQ15858 1988 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 COL4A1P02462 1669 aa18.18■□□□□ 0.5
ACTN1-219ENST00000556432 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
ACTN1-219ENST00000556432 HDGFL1Q5TGJ6 251 aa18.17■□□□□ 0.5
ACTN1-219ENST00000556432 ISCA1Q9BUE6 129 aa18.17■□□□□ 0.5
ACTN1-219ENST00000556432 MYOZ2Q9NPC6 264 aa18.17■□□□□ 0.5
ACTN1-219ENST00000556432 USP17L8P0C7I0 530 aa18.16■□□□□ 0.5
ACTN1-219ENST00000556432 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
ACTN1-219ENST00000556432 GPR25O00155 361 aa18.15■□□□□ 0.5
ACTN1-219ENST00000556432 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
ACTN1-219ENST00000556432 PRAMEF18Q5VWM3 479 aa18.15■□□□□ 0.5
ACTN1-219ENST00000556432 FBXO46Q6PJ61 603 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-219ENST00000556432 SEC31BQ9NQW1 1179 aa18.15■□□□□ 0.5
ACTN1-219ENST00000556432 PODXL2Q9NZ53 605 aa18.15■□□□□ 0.5
ACTN1-219ENST00000556432 PITPNM2Q9BZ72 1349 aa18.15■□□□□ 0.5
ACTN1-219ENST00000556432 NF2P35240 595 aa18.14■□□□□ 0.49
ACTN1-219ENST00000556432 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-219ENST00000556432 USP17L3A6NCW0 530 aa18.13■□□□□ 0.49
ACTN1-219ENST00000556432 USP17L4A6NCW7 530 aa18.13■□□□□ 0.49
ACTN1-219ENST00000556432 HSP90B1P14625 803 aaKnown RBP18.13■□□□□ 0.49
ACTN1-219ENST00000556432 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
ACTN1-219ENST00000556432 USP17L1Q7RTZ2 530 aa18.13■□□□□ 0.49
ACTN1-219ENST00000556432 FKTNO75072 461 aa18.12■□□□□ 0.49
ACTN1-219ENST00000556432 SREBF2Q12772 1141 aa18.12■□□□□ 0.49
ACTN1-219ENST00000556432 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
ACTN1-219ENST00000556432 FBXW7Q969H0 707 aa18.12■□□□□ 0.49
ACTN1-219ENST00000556432 CCDC85AQ96PX6 553 aaPredicted RBP18.12■□□□□ 0.49
ACTN1-219ENST00000556432 ZNF609O15014 1411 aa18.12■□□□□ 0.49
ACTN1-219ENST00000556432 RIC3Q7Z5B4 369 aa18.11■□□□□ 0.49
ACTN1-219ENST00000556432 GMLQ99445 158 aa18.11■□□□□ 0.49
ACTN1-219ENST00000556432 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
ACTN1-219ENST00000556432 XDHP47989 1333 aa18.11■□□□□ 0.49
ACTN1-219ENST00000556432 CHL1O00533 1208 aa18.1■□□□□ 0.49
ACTN1-219ENST00000556432 TM4SF4P48230 202 aa18.1■□□□□ 0.49
ACTN1-219ENST00000556432 GOLGA2Q08379 1002 aa18.1■□□□□ 0.49
ACTN1-219ENST00000556432 PRKG1Q13976 671 aa18.1■□□□□ 0.49
ACTN1-219ENST00000556432 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
ACTN1-219ENST00000556432 OGFOD1Q8N543 542 aa18.1■□□□□ 0.49
ACTN1-219ENST00000556432 ZBTB38Q8NAP3 1195 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-219ENST00000556432 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-219ENST00000556432 TRIM28Q13263 835 aaKnown RBP18.09■□□□□ 0.49
ACTN1-219ENST00000556432 NOM1Q5C9Z4 860 aaKnown RBP18.09■□□□□ 0.49
ACTN1-219ENST00000556432 ANKRD18AQ8IVF6 992 aa18.09■□□□□ 0.49
ACTN1-219ENST00000556432 HOXB7P09629 217 aa18.08■□□□□ 0.48
ACTN1-219ENST00000556432 ATP2B4P23634 1241 aa18.08■□□□□ 0.48
ACTN1-219ENST00000556432 ARMC9Q7Z3E5 817 aa18.08■□□□□ 0.48
ACTN1-219ENST00000556432 PODNQ7Z5L7 613 aa18.08■□□□□ 0.48
ACTN1-219ENST00000556432 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.48
ACTN1-219ENST00000556432 PTPN12Q05209 780 aaKnown RBP18.07■□□□□ 0.48
ACTN1-219ENST00000556432 HABP4Q5JVS0 413 aaKnown RBP18.07■□□□□ 0.48
ACTN1-219ENST00000556432 JARID2Q92833 1246 aaPredicted RBP18.07■□□□□ 0.48
ACTN1-219ENST00000556432 MYD88Q99836 296 aa18.07■□□□□ 0.48
ACTN1-219ENST00000556432 MXD3Q9BW11 206 aa18.07■□□□□ 0.48
ACTN1-219ENST00000556432 R3HDMLQ9H3Y0 253 aa18.07■□□□□ 0.48
ACTN1-219ENST00000556432 PSME4Q14997 1843 aa18.07■□□□□ 0.48
ACTN1-219ENST00000556432 SASH1O94885 1247 aa18.06■□□□□ 0.48
ACTN1-219ENST00000556432 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
ACTN1-219ENST00000556432 TRIM17Q9Y577 477 aa18.06■□□□□ 0.48
ACTN1-219ENST00000556432 WNT10BO00744 389 aa18.05■□□□□ 0.48
ACTN1-219ENST00000556432 PDE8AO60658 829 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms